Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLUC023_RS11665 Genome accession   NZ_CP158368
Coordinates   2264187..2265473 (-) Length   428 a.a.
NCBI ID   WP_259751248.1    Uniprot ID   -
Organism   Lactococcus cremoris strain UC023     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2259187..2270473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC023_RS11645 (LLUC023_11655) - 2259692..2260285 (-) 594 Protein_2269 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLUC023_RS11650 (LLUC023_11660) - 2260459..2260650 (-) 192 WP_021211222.1 hypothetical protein -
  LLUC023_RS11655 (LLUC023_11665) - 2260920..2262251 (-) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLUC023_RS11660 (LLUC023_11670) - 2262267..2264117 (-) 1851 WP_021211224.1 proline--tRNA ligase -
  LLUC023_RS11665 (LLUC023_11675) eeP 2264187..2265473 (-) 1287 WP_259751248.1 RIP metalloprotease RseP Regulator
  LLUC023_RS11670 (LLUC023_11680) - 2265492..2266295 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLUC023_RS11675 (LLUC023_11685) - 2266295..2267029 (-) 735 WP_011836054.1 isoprenyl transferase -
  LLUC023_RS11680 (LLUC023_11690) yajC 2267379..2267711 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLUC023_RS11685 (LLUC023_11695) - 2267806..2268504 (-) 699 Protein_2277 DNA alkylation repair protein -
  LLUC023_RS11690 (LLUC023_11700) rlmH 2268522..2269001 (-) 480 WP_011677194.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46499.04 Da        Isoelectric Point: 6.2651

>NTDB_id=1011033 LLUC023_RS11665 WP_259751248.1 2264187..2265473(-) (eeP) [Lactococcus cremoris strain UC023]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAERAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1011033 LLUC023_RS11665 WP_259751248.1 2264187..2265473(-) (eeP) [Lactococcus cremoris strain UC023]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGA
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561


Multiple sequence alignment