Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   H1W91_RS10080 Genome accession   NZ_LR822032
Coordinates   1199501..1199704 (-) Length   67 a.a.
NCBI ID   WP_224103626.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1050     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194501..1204704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W91_RS06260 (STHERMO_1359) - 1194615..1195709 (-) 1095 WP_014608473.1 sensor histidine kinase -
  H1W91_RS06265 (STHERMO_1360) - 1195702..1196439 (-) 738 WP_180477050.1 ABC transporter permease -
  H1W91_RS06270 (STHERMO_1362) - 1196436..1197304 (-) 869 Protein_1181 ABC transporter ATP-binding protein -
  H1W91_RS06275 (STHERMO_1363) - 1197486..1197695 (-) 210 WP_180477051.1 hypothetical protein -
  H1W91_RS06280 (STHERMO_1364) - 1197847..1198785 (-) 939 WP_180477052.1 bile acid:sodium symporter family protein -
  H1W91_RS06285 (STHERMO_1365) - 1198928..1199377 (-) 450 WP_096811543.1 cytidine deaminase family protein -
  H1W91_RS10080 (STHERMO_1366) comA/nlmT 1199501..1199704 (-) 204 WP_224103626.1 ABC transporter ATP-binding protein Regulator
  H1W91_RS10085 (STHERMO_1368) - 1200183..1200713 (+) 531 WP_224103625.1 hypothetical protein -
  H1W91_RS06300 (STHERMO_1369) - 1200717..1201277 (+) 561 WP_173940410.1 hypothetical protein -
  H1W91_RS06305 (STHERMO_1371) - 1201912..1202358 (-) 447 WP_173940411.1 GNAT family N-acetyltransferase -
  H1W91_RS06310 - 1202373..1203101 (-) 729 Protein_1189 helicase-related protein -
  H1W91_RS06315 (STHERMO_1374) - 1203196..1203636 (-) 441 WP_176243261.1 ASCH domain-containing protein -
  H1W91_RS10090 (STHERMO_1375) - 1203648..1203893 (-) 246 WP_224103624.1 hypothetical protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7756.99 Da        Isoelectric Point: 4.1469

>NTDB_id=1010880 H1W91_RS10080 WP_224103626.1 1199501..1199704(-) (comA/nlmT) [Streptococcus thermophilus isolate STH_CIRM_1050]
MARALLMKTDILFLDEFSSGIDLETLSKIENRLLQTSKLIIYITHVDTDRIIQQFDEIIDLNGFVDL

Nucleotide


Download         Length: 204 bp        

>NTDB_id=1010880 H1W91_RS10080 WP_224103626.1 1199501..1199704(-) (comA/nlmT) [Streptococcus thermophilus isolate STH_CIRM_1050]
TTGGCAAGAGCCTTATTGATGAAGACGGATATCTTATTTTTAGACGAATTTTCTTCTGGTATTGACCTTGAAACGTTATC
AAAAATAGAGAATCGACTTTTACAAACGAGTAAATTAATTATTTACATCACACATGTAGACACCGATAGAATTATCCAAC
AATTTGATGAAATAATAGATTTGAATGGGTTTGTAGACTTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

45

89.552

0.403
  comA Streptococcus gordonii str. Challis substr. CH1

32.911

100

0.388

Multiple sequence alignment