Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ABOE65_RS11795 | Genome accession | NZ_CP158358 |
| Coordinates | 2412756..2413793 (-) | Length | 345 a.a. |
| NCBI ID | WP_012117984.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain HY23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2407756..2418793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABOE65_RS11745 (ABOE65_11735) | - | 2407990..2408775 (-) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| ABOE65_RS11750 (ABOE65_11740) | - | 2408840..2409424 (-) | 585 | WP_012117977.1 | signal peptidase I SipW | - |
| ABOE65_RS11755 (ABOE65_11745) | tapA | 2409396..2410067 (-) | 672 | WP_012117978.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ABOE65_RS11760 (ABOE65_11750) | - | 2410326..2410655 (+) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| ABOE65_RS11765 (ABOE65_11755) | - | 2410695..2410874 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| ABOE65_RS11770 (ABOE65_11760) | comGG | 2410931..2411308 (-) | 378 | WP_012117980.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABOE65_RS11775 (ABOE65_11765) | comGF | 2411309..2411809 (-) | 501 | WP_012117981.1 | competence type IV pilus minor pilin ComGF | - |
| ABOE65_RS11780 (ABOE65_11770) | comGE | 2411718..2412032 (-) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| ABOE65_RS11785 (ABOE65_11775) | comGD | 2412016..2412453 (-) | 438 | WP_012117983.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABOE65_RS11790 (ABOE65_11780) | comGC | 2412443..2412751 (-) | 309 | WP_003153087.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABOE65_RS11795 (ABOE65_11785) | comGB | 2412756..2413793 (-) | 1038 | WP_012117984.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABOE65_RS11800 (ABOE65_11790) | comGA | 2413780..2414850 (-) | 1071 | WP_012117985.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABOE65_RS11805 (ABOE65_11795) | - | 2415047..2415997 (-) | 951 | WP_007408319.1 | magnesium transporter CorA family protein | - |
| ABOE65_RS11810 (ABOE65_11800) | - | 2416143..2417444 (+) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| ABOE65_RS11815 (ABOE65_11805) | - | 2417482..2418312 (-) | 831 | WP_012117987.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39527.77 Da Isoelectric Point: 9.4012
>NTDB_id=1010866 ABOE65_RS11795 WP_012117984.1 2412756..2413793(-) (comGB) [Bacillus velezensis strain HY23]
MKRINRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLQLQLHKRQLAELTDGIRRLRQGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTDQIKKMLRYPMFLISSVCVMFYILQSLIIPQFAGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRINRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLQLQLHKRQLAELTDGIRRLRQGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTDQIKKMLRYPMFLISSVCVMFYILQSLIIPQFAGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1010866 ABOE65_RS11795 WP_012117984.1 2412756..2413793(-) (comGB) [Bacillus velezensis strain HY23]
ATGAAGCGGATTAACCGAACCTGGCCCTTGAAGGATCAAGCAGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGCAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCACAAAGAAGCCGTCTCTATCTGCTAT
TTCGCTGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGGA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTGCTGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAAAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCACTATTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTATCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAACCGAACCTGGCCCTTGAAGGATCAAGCAGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGCAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCACAAAGAAGCCGTCTCTATCTGCTAT
TTCGCTGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGGA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTGCTGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAAAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCACTATTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTATCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.635 |
93.623 |
0.614 |