Detailed information NTG1010089

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H0513_RS07215
• Genome accession: NZ_LR822023
• Coordinates: 1371641..1372567 (-)
• Length: 308 a.a.
• NCBI ID: WP_179972090.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_368
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1366641..1377567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0513_RS07185 (STHERMO_1617)	-	1366721..1367515 (-)	795	WP_179972085.1	HAD-IIB family hydrolase	-
H0513_RS07190 (STHERMO_1618)	-	1367697..1368074 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
H0513_RS07195 (STHERMO_1619)	-	1368079..1368777 (+)	699	WP_179972086.1	ABC transporter ATP-binding protein	-
H0513_RS07200 (STHERMO_1620)	-	1368789..1369574 (+)	786	WP_179972087.1	ABC transporter permease	-
H0513_RS07205 (STHERMO_1621)	-	1369627..1370553 (-)	927	WP_179972088.1	ATP-binding cassette domain-containing protein	-
H0513_RS07210 (STHERMO_1622)	amiE	1370546..1371631 (-)	1086	WP_179972089.1	ABC transporter ATP-binding protein	Regulator
H0513_RS07215 (STHERMO_1623)	amiD	1371641..1372567 (-)	927	WP_179972090.1	oligopeptide ABC transporter permease OppC	Regulator
H0513_RS07220 (STHERMO_1624)	amiC	1372567..1374060 (-)	1494	WP_164135541.1	ABC transporter permease	Regulator
H0513_RS07225 (STHERMO_1625)	amiA3	1374126..1376102 (-)	1977	WP_179972091.1	peptide ABC transporter substrate-binding protein	Regulator
H0513_RS07230	-	1376338..1376528 (-)	191	Protein_1358	IS3 family transposase	-
H0513_RS11435	-	1376522..1376932 (-)	411	Protein_1359	ATP-binding cassette domain-containing protein	-
H0513_RS11440 (STHERMO_1628)	-	1377030..1377278 (-)	249	Protein_1360	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34670.87 Da
• Isoelectric Point: 9.7054

>NTDB_id=1010089 H0513_RS07215 WP_179972090.1 1371641..1372567(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_368]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1010089 H0513_RS07215 WP_179972090.1 1371641..1372567(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTACTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.701	100	0.987
amiD	Streptococcus thermophilus LMD-9	98.701	100	0.987
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955