Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABN702_RS19775 | Genome accession | NZ_CP158164 |
| Coordinates | 3876603..3879041 (-) | Length | 812 a.a. |
| NCBI ID | WP_417898373.1 | Uniprot ID | - |
| Organism | Bacillus sp. CSS-39 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3871603..3884041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABN702_RS19755 (ABN702_19715) | ispD | 3871984..3872673 (-) | 690 | WP_417898371.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ABN702_RS19760 (ABN702_19720) | - | 3872756..3873847 (-) | 1092 | WP_417898372.1 | PIN/TRAM domain-containing protein | - |
| ABN702_RS19765 (ABN702_19725) | disA | 3873971..3875044 (-) | 1074 | WP_386645328.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ABN702_RS19770 (ABN702_19730) | radA | 3875047..3876423 (-) | 1377 | WP_204420071.1 | DNA repair protein RadA | Machinery gene |
| ABN702_RS19775 (ABN702_19735) | clpC | 3876603..3879041 (-) | 2439 | WP_417898373.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ABN702_RS19780 (ABN702_19740) | - | 3879064..3880128 (-) | 1065 | WP_417898374.1 | protein arginine kinase | - |
| ABN702_RS19785 (ABN702_19745) | - | 3880129..3880677 (-) | 549 | WP_417898375.1 | UvrB/UvrC motif-containing protein | - |
| ABN702_RS19790 (ABN702_19750) | - | 3880691..3881152 (-) | 462 | WP_417898376.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 812 a.a. Molecular weight: 90440.15 Da Isoelectric Point: 5.8730
>NTDB_id=1010050 ABN702_RS19775 WP_417898373.1 3876603..3879041(-) (clpC) [Bacillus sp. CSS-39]
MMFGRFTERAQKVLALAQEEALRLSHNNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQKEVENLIGRGQDSGQSIPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSGGHQGGASQNV
NTPTLDSLARDLTAVAREGSLDPVIGRAKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD
EYRKYIEKDAALERRFQPIQVDEPTAAESIQILTGLRDRYEAHHRVSITDEAIEQAVKLSDRYISDRFLPDKAIDLIDEA
GSKVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFEKAASLRDTEQRLREQLEDTKKTWKEKQGQENSEVTVEDIAM
VVSSWTGIPVSKLAQTETDKLLNMEQLLHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL
AESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGR
LTDSKGRTVDFRNTLVIMTSNVGADALKRNKYVGFNVQDDNQNYKDMKGKVMEELKKAFRPEFLNRVDEMIVFHSLEKTH
LKEIVTLLSDQLTKRLKEQDIELELTDATKEKISEEGYDPEYGARPLRRAIQKHVEDKLSEELLKGNIEKGKKIVMDVVD
GEFVVRDVEIVK
MMFGRFTERAQKVLALAQEEALRLSHNNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQKEVENLIGRGQDSGQSIPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSGGHQGGASQNV
NTPTLDSLARDLTAVAREGSLDPVIGRAKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD
EYRKYIEKDAALERRFQPIQVDEPTAAESIQILTGLRDRYEAHHRVSITDEAIEQAVKLSDRYISDRFLPDKAIDLIDEA
GSKVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFEKAASLRDTEQRLREQLEDTKKTWKEKQGQENSEVTVEDIAM
VVSSWTGIPVSKLAQTETDKLLNMEQLLHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL
AESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGR
LTDSKGRTVDFRNTLVIMTSNVGADALKRNKYVGFNVQDDNQNYKDMKGKVMEELKKAFRPEFLNRVDEMIVFHSLEKTH
LKEIVTLLSDQLTKRLKEQDIELELTDATKEKISEEGYDPEYGARPLRRAIQKHVEDKLSEELLKGNIEKGKKIVMDVVD
GEFVVRDVEIVK
Nucleotide
Download Length: 2439 bp
>NTDB_id=1010050 ABN702_RS19775 WP_417898373.1 3876603..3879041(-) (clpC) [Bacillus sp. CSS-39]
ATGATGTTCGGTAGATTTACAGAGAGAGCACAGAAAGTACTTGCATTAGCACAGGAAGAGGCACTTCGTTTAAGCCATAA
TAATATTGGGACAGAGCATATCCTGTTAGGACTGGTAAGAGAGGGAGAGGGTATTGCCGCTAAAGCGCTGATTGCTCTTG
GCCTTGGTCCGGAGAAGATTCAAAAAGAAGTGGAGAATTTGATTGGACGTGGACAAGATAGCGGACAATCCATTCCGCAC
TACACACCTCGTGCGAAGAAAGTGATTGAGCTTTCCATGGATGAAGCCCGTAAGTTGGGACATTCCTATGTAGGCACAGA
GCATATCCTCCTCGGCTTGATCCGTGAAGGCGAGGGAGTGGCGGCACGTGTACTGAATAATCTTGGTGTCAGCCTGAACA
AGGCTCGCCAGCAGGTGCTTCAGCTACTGGGCAGCAATGAATCTTCAGGAGGCCATCAGGGTGGAGCTTCCCAGAATGTG
AACACACCTACACTTGATAGTCTTGCGCGTGACCTTACAGCTGTTGCAAGAGAAGGTAGCCTGGATCCGGTAATCGGAAG
AGCAAAAGAAATTCAGCGTGTGATTGAAGTACTTAGCAGAAGAACAAAAAATAACCCGGTTCTGATTGGAGAGCCTGGGG
TAGGGAAGACGGCTATCGCGGAAGGATTGGCGCAGCAGATTGTCAACAACGAGGTGCCGGAGATTCTTCGTGATAAGCGT
GTCATGACGCTTGATATGGGTACAGTGGTAGCAGGAACGAAATATCGTGGGGAGTTCGAGGATCGCCTGAAAAAGGTGAT
GGATGAAATCCGCCAGGCAGGCAACATCATTCTATTCATTGATGAGCTTCATACGTTGATTGGAGCAGGCGGTGCGGAGG
GTGCCATTGATGCATCCAACATTTTGAAACCATCCCTTGCTCGTGGGGAGCTTCAATGTATCGGTGCCACAACCCTGGAT
GAGTATCGTAAATATATCGAAAAGGATGCCGCGCTTGAGCGACGCTTCCAGCCGATTCAGGTGGATGAGCCAACAGCGGC
TGAGTCCATTCAGATTCTGACAGGACTGCGTGACCGCTATGAGGCGCATCACCGTGTATCTATCACGGATGAAGCGATTG
AACAGGCGGTTAAGCTTTCCGATCGTTATATTTCGGACCGCTTCCTGCCGGATAAGGCGATTGACCTTATCGATGAGGCT
GGCTCCAAAGTAAGACTGCGTTCATTCACTACACCTCCTAATCTAAAAGAACTGGAAGTGAAGCTGGAATCCGTCCGCAA
CGAAAAAGATGCAGCTGTACAAAGCCAGGAATTTGAAAAGGCGGCGTCCTTGCGTGATACAGAGCAGCGCTTGCGCGAGC
AGCTTGAGGATACAAAGAAAACGTGGAAGGAAAAGCAGGGTCAGGAGAATTCCGAGGTGACAGTCGAAGACATTGCCATG
GTAGTGTCCAGCTGGACTGGAATTCCGGTATCCAAGCTTGCCCAGACCGAAACAGATAAATTGTTGAACATGGAACAGCT
GCTTCACTCCCGTGTCATCGGTCAGGACGAAGCGGTGAAAGCAGTATCCAAGGCGGTGCGTCGAGCACGTGCCGGCTTGA
AAGACCCTAAACGTCCTATCGGCTCCTTCATCTTCCTTGGACCTACGGGGGTAGGTAAAACGGAACTTGCGAGAGCTTTG
GCCGAGTCCATTTTCGGCGATGAGGATGCGATGATCCGCATTGATATGTCCGAGTACATGGAGAAGCACTCCACTTCCCG
TCTGGTAGGGTCTCCTCCTGGATATGTAGGATACGATGAAGGTGGACAATTGACAGAGAAGGTTCGCCGCAAACCATATT
CAGTCATTTTGCTGGATGAGATAGAAAAAGCGCATCCGGATGTGTTCAACATTCTCCTGCAAGTGCTGGAAGATGGCCGT
TTGACAGATTCAAAGGGACGTACGGTCGATTTCCGCAACACGCTTGTCATTATGACATCCAACGTTGGAGCGGACGCATT
AAAACGCAACAAGTATGTTGGTTTCAATGTACAGGATGATAATCAGAACTATAAGGACATGAAAGGAAAAGTGATGGAGG
AGCTGAAAAAGGCTTTCCGTCCGGAGTTCCTGAACCGTGTCGATGAGATGATTGTATTCCACTCCTTAGAGAAAACGCAC
CTCAAGGAAATTGTGACACTTCTGTCCGATCAATTGACGAAGCGTCTGAAGGAACAGGATATCGAACTGGAATTGACCGA
TGCAACAAAAGAGAAGATCTCGGAGGAAGGGTACGATCCGGAATACGGTGCAAGACCTTTGCGCCGAGCTATCCAGAAGC
ATGTGGAAGATAAACTATCTGAAGAGTTGTTGAAAGGAAATATTGAAAAGGGCAAGAAAATTGTCATGGATGTGGTAGAT
GGAGAGTTTGTTGTCCGTGACGTGGAAATAGTAAAATAA
ATGATGTTCGGTAGATTTACAGAGAGAGCACAGAAAGTACTTGCATTAGCACAGGAAGAGGCACTTCGTTTAAGCCATAA
TAATATTGGGACAGAGCATATCCTGTTAGGACTGGTAAGAGAGGGAGAGGGTATTGCCGCTAAAGCGCTGATTGCTCTTG
GCCTTGGTCCGGAGAAGATTCAAAAAGAAGTGGAGAATTTGATTGGACGTGGACAAGATAGCGGACAATCCATTCCGCAC
TACACACCTCGTGCGAAGAAAGTGATTGAGCTTTCCATGGATGAAGCCCGTAAGTTGGGACATTCCTATGTAGGCACAGA
GCATATCCTCCTCGGCTTGATCCGTGAAGGCGAGGGAGTGGCGGCACGTGTACTGAATAATCTTGGTGTCAGCCTGAACA
AGGCTCGCCAGCAGGTGCTTCAGCTACTGGGCAGCAATGAATCTTCAGGAGGCCATCAGGGTGGAGCTTCCCAGAATGTG
AACACACCTACACTTGATAGTCTTGCGCGTGACCTTACAGCTGTTGCAAGAGAAGGTAGCCTGGATCCGGTAATCGGAAG
AGCAAAAGAAATTCAGCGTGTGATTGAAGTACTTAGCAGAAGAACAAAAAATAACCCGGTTCTGATTGGAGAGCCTGGGG
TAGGGAAGACGGCTATCGCGGAAGGATTGGCGCAGCAGATTGTCAACAACGAGGTGCCGGAGATTCTTCGTGATAAGCGT
GTCATGACGCTTGATATGGGTACAGTGGTAGCAGGAACGAAATATCGTGGGGAGTTCGAGGATCGCCTGAAAAAGGTGAT
GGATGAAATCCGCCAGGCAGGCAACATCATTCTATTCATTGATGAGCTTCATACGTTGATTGGAGCAGGCGGTGCGGAGG
GTGCCATTGATGCATCCAACATTTTGAAACCATCCCTTGCTCGTGGGGAGCTTCAATGTATCGGTGCCACAACCCTGGAT
GAGTATCGTAAATATATCGAAAAGGATGCCGCGCTTGAGCGACGCTTCCAGCCGATTCAGGTGGATGAGCCAACAGCGGC
TGAGTCCATTCAGATTCTGACAGGACTGCGTGACCGCTATGAGGCGCATCACCGTGTATCTATCACGGATGAAGCGATTG
AACAGGCGGTTAAGCTTTCCGATCGTTATATTTCGGACCGCTTCCTGCCGGATAAGGCGATTGACCTTATCGATGAGGCT
GGCTCCAAAGTAAGACTGCGTTCATTCACTACACCTCCTAATCTAAAAGAACTGGAAGTGAAGCTGGAATCCGTCCGCAA
CGAAAAAGATGCAGCTGTACAAAGCCAGGAATTTGAAAAGGCGGCGTCCTTGCGTGATACAGAGCAGCGCTTGCGCGAGC
AGCTTGAGGATACAAAGAAAACGTGGAAGGAAAAGCAGGGTCAGGAGAATTCCGAGGTGACAGTCGAAGACATTGCCATG
GTAGTGTCCAGCTGGACTGGAATTCCGGTATCCAAGCTTGCCCAGACCGAAACAGATAAATTGTTGAACATGGAACAGCT
GCTTCACTCCCGTGTCATCGGTCAGGACGAAGCGGTGAAAGCAGTATCCAAGGCGGTGCGTCGAGCACGTGCCGGCTTGA
AAGACCCTAAACGTCCTATCGGCTCCTTCATCTTCCTTGGACCTACGGGGGTAGGTAAAACGGAACTTGCGAGAGCTTTG
GCCGAGTCCATTTTCGGCGATGAGGATGCGATGATCCGCATTGATATGTCCGAGTACATGGAGAAGCACTCCACTTCCCG
TCTGGTAGGGTCTCCTCCTGGATATGTAGGATACGATGAAGGTGGACAATTGACAGAGAAGGTTCGCCGCAAACCATATT
CAGTCATTTTGCTGGATGAGATAGAAAAAGCGCATCCGGATGTGTTCAACATTCTCCTGCAAGTGCTGGAAGATGGCCGT
TTGACAGATTCAAAGGGACGTACGGTCGATTTCCGCAACACGCTTGTCATTATGACATCCAACGTTGGAGCGGACGCATT
AAAACGCAACAAGTATGTTGGTTTCAATGTACAGGATGATAATCAGAACTATAAGGACATGAAAGGAAAAGTGATGGAGG
AGCTGAAAAAGGCTTTCCGTCCGGAGTTCCTGAACCGTGTCGATGAGATGATTGTATTCCACTCCTTAGAGAAAACGCAC
CTCAAGGAAATTGTGACACTTCTGTCCGATCAATTGACGAAGCGTCTGAAGGAACAGGATATCGAACTGGAATTGACCGA
TGCAACAAAAGAGAAGATCTCGGAGGAAGGGTACGATCCGGAATACGGTGCAAGACCTTTGCGCCGAGCTATCCAGAAGC
ATGTGGAAGATAAACTATCTGAAGAGTTGTTGAAAGGAAATATTGAAAAGGGCAAGAAAATTGTCATGGATGTGGTAGAT
GGAGAGTTTGTTGTCCGTGACGTGGAAATAGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
89.95 |
99.261 |
0.893 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.688 |
98.645 |
0.49 |
| clpC | Streptococcus thermophilus LMD-9 |
46.45 |
100 |
0.475 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.468 |
| clpC | Streptococcus mutans UA159 |
44.005 |
100 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
48.591 |
91.749 |
0.446 |
| clpC | Streptococcus pneumoniae Rx1 |
48.591 |
91.749 |
0.446 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.456 |
91.749 |
0.445 |
| clpE | Streptococcus mutans UA159 |
53.881 |
80.911 |
0.436 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.44 |
87.931 |
0.435 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.259 |
78.079 |
0.424 |
| clpE | Streptococcus pneumoniae Rx1 |
54.259 |
78.079 |
0.424 |
| clpE | Streptococcus pneumoniae D39 |
54.259 |
78.079 |
0.424 |
| clpE | Streptococcus pneumoniae R6 |
54.259 |
78.079 |
0.424 |