Detailed information NTG1009953

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H0514_RS03045
• Genome accession: NZ_LR822020
• Coordinates: 582830..583756 (+)
• Length: 308 a.a.
• NCBI ID: WP_179972090.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_956
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 577830..588756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0514_RS11130 (STHERMO_0677)	-	578119..578367 (+)	249	Protein_552	TatD family hydrolase	-
H0514_RS11135	-	578465..578875 (+)	411	Protein_553	ATP-binding cassette domain-containing protein	-
H0514_RS03030	-	578869..579059 (+)	191	Protein_554	IS3 family transposase	-
H0514_RS03035 (STHERMO_0680)	amiA3	579295..581271 (+)	1977	WP_179972091.1	peptide ABC transporter substrate-binding protein	Regulator
H0514_RS03040 (STHERMO_0681)	amiC	581337..582830 (+)	1494	WP_164135541.1	ABC transporter permease	Regulator
H0514_RS03045 (STHERMO_0682)	amiD	582830..583756 (+)	927	WP_179972090.1	oligopeptide ABC transporter permease OppC	Regulator
H0514_RS03050 (STHERMO_0683)	amiE	583766..584851 (+)	1086	WP_179972089.1	ABC transporter ATP-binding protein	Regulator
H0514_RS03055 (STHERMO_0684)	-	584844..585770 (+)	927	WP_179972088.1	ATP-binding cassette domain-containing protein	-
H0514_RS03060 (STHERMO_0685)	-	585823..586608 (-)	786	WP_179972087.1	ABC transporter permease	-
H0514_RS03065 (STHERMO_0686)	-	586620..587318 (-)	699	WP_179972086.1	ABC transporter ATP-binding protein	-
H0514_RS03070 (STHERMO_0687)	-	587323..587700 (-)	378	WP_011226300.1	GntR family transcriptional regulator	-
H0514_RS03075 (STHERMO_0688)	-	587882..588676 (+)	795	WP_179972085.1	HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34670.87 Da
• Isoelectric Point: 9.7054

>NTDB_id=1009953 H0514_RS03045 WP_179972090.1 582830..583756(+) (amiD) [Streptococcus thermophilus isolate STH_CIRM_956]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1009953 H0514_RS03045 WP_179972090.1 582830..583756(+) (amiD) [Streptococcus thermophilus isolate STH_CIRM_956]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTACTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.701	100	0.987
amiD	Streptococcus thermophilus LMD-9	98.701	100	0.987
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955