Detailed information NTG1009826

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: ABFV67_RS09465
• Genome accession: NZ_CP158116
• Coordinates: 2041204..2042565 (-)
• Length: 453 a.a.
• NCBI ID: WP_158139024.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain IS021
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2036204..2047565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFV67_RS09445 (ABFV67_09445)	folD	2037376..2038248 (+)	873	WP_154168653.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	-
ABFV67_RS09450 (ABFV67_09450)	-	2038340..2039542 (-)	1203	WP_154168655.1	NupC/NupG family nucleoside CNT transporter	-
ABFV67_RS09455 (ABFV67_09455)	-	2039844..2040797 (-)	954	WP_158144093.1	LysR family transcriptional regulator	-
ABFV67_RS09460 (ABFV67_09460)	luxU	2040849..2041196 (-)	348	WP_154168657.1	quorum-sensing phosphorelay protein LuxU	-
ABFV67_RS09465 (ABFV67_09465)	luxO	2041204..2042565 (-)	1362	WP_158139024.1	quorum-sensing sigma-54 dependent transcriptional regulator LuxO	Regulator
ABFV67_RS09470 (ABFV67_09470)	uvrB	2042709..2044739 (-)	2031	WP_158144095.1	excinuclease ABC subunit UvrB	-
ABFV67_RS09480 (ABFV67_09480)	-	2045402..2046640 (-)	1239	WP_004395664.1	dicarboxylate/amino acid:cation symporter	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50621.70 Da
• Isoelectric Point: 5.3866

>NTDB_id=1009826 ABFV67_RS09465 WP_158139024.1 2041204..2042565(-) (luxO) [Vibrio metschnikovii strain IS021]
MVEDTASVAALYRSYLTPLEIDINIVSTGRDAIESLNRRTPDLILLDLRLPDMTGMDVLAAVKKQSPDVPIIFMTAHGSI
DTAVEAMRQGAQDFLIKPCEADRLRITVNNAMRKANKLKSENYDPNNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFIT
GESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAASDRQGAAELADGGTLFLDELCEMDLD
LQTKLLRFIQTGTFQKVGSSKLHSVDVRFVCATNRDPWKEVQQGRFREDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLG
HMAKEEGKGFVRLSSEVTERFKHYEWPGNVRQLQNVLRNVVVLNDGQEITLSMLPPPLNAPRMAEPTFLSQDEKVLSVHD
IFPLWLTEKQAIEKAIEVCDGNIPRAASYLDVSPSTIYRKLQTWNEKEQEKER

Nucleotide

• Length: 1362 bp

>NTDB_id=1009826 ABFV67_RS09465 WP_158139024.1 2041204..2042565(-) (luxO) [Vibrio metschnikovii strain IS021]
ATGGTTGAGGATACGGCTTCTGTGGCAGCATTGTACCGATCCTATCTGACTCCGCTAGAGATTGACATTAATATCGTCAG
CACCGGGCGCGATGCGATAGAGAGCCTTAACCGACGAACGCCCGACTTAATCCTGTTAGATTTACGTTTGCCTGATATGA
CAGGAATGGATGTGCTTGCCGCTGTAAAAAAACAATCTCCCGATGTGCCGATCATCTTTATGACCGCACATGGTTCGATC
GATACTGCGGTCGAGGCGATGCGTCAAGGTGCACAAGACTTTCTGATCAAGCCGTGTGAGGCGGATCGGCTACGTATTAC
CGTCAATAATGCGATGCGCAAAGCGAATAAGCTTAAAAGCGAAAATTACGATCCAAATAATCAAAACTATCAAGGTTTTA
TTGGCAGTAGCCAAACGATGCAGGCGGTATATCGCACGATTGATTCCGCAGCGAGCAGTAAAGCCAGCATTTTTATTACC
GGTGAGAGTGGTACTGGTAAAGAAGTGTGCGCCGAAGCGATTCATGCCGCCAGTAAACGAGGCGACAAACCGTTTATCGC
CATCAACTGTGCTGCGATTCCAAAAGACTTAATTGAAAGTGAACTTTTTGGTCACGTCAAAGGTGCCTTTACCGGAGCCG
CCTCAGATAGACAAGGTGCTGCGGAGTTAGCTGATGGTGGAACGCTCTTTTTGGATGAGCTGTGCGAGATGGATCTTGAT
CTGCAAACCAAATTATTGCGTTTTATCCAGACTGGTACTTTTCAAAAAGTCGGCTCTTCTAAGCTACACAGTGTGGATGT
GCGGTTTGTTTGTGCGACGAACCGTGATCCCTGGAAAGAAGTTCAACAAGGCCGTTTTCGCGAGGACTTATATTACCGTT
TATACGTGATTCCATTACATTTACCGCCACTACGAGAACGGGGCGATGATGTGATTGAAATTGCTTATTCATTATTAGGT
CATATGGCGAAAGAGGAAGGCAAAGGATTTGTTCGTCTCTCTTCAGAAGTGACAGAGCGTTTTAAGCACTATGAATGGCC
AGGTAATGTGCGCCAGTTACAAAACGTACTGCGTAATGTCGTGGTATTGAATGATGGACAAGAAATTACCTTATCGATGC
TACCTCCGCCACTCAATGCGCCAAGAATGGCAGAGCCTACCTTTTTGTCTCAGGATGAGAAGGTGCTTTCTGTGCATGAT
ATTTTTCCGTTATGGCTAACGGAAAAGCAAGCGATAGAAAAAGCCATTGAAGTGTGTGATGGCAATATTCCAAGAGCGGC
GAGTTATTTAGATGTCAGTCCCTCAACGATTTATCGCAAACTGCAAACCTGGAATGAAAAAGAGCAGGAAAAGGAGCGTT
AG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (134-299)

• Response regulator receiver domain (Response_reg) (2-108)

• Bacterial regulatory protein, Fis family (HTH_8) (404-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	87.305	99.117	0.865
pilR	Pseudomonas aeruginosa PAK	38.876	98.234	0.382