Detailed information NTG0100970

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: D934_RS12525
• Genome accession: NZ_CP006696
• Coordinates: 2704344..2705954 (-)
• Length: 536 a.a.
• NCBI ID: WP_020851243.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. sandyi Ann-1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2699344..2710954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D934_RS12510 (D934_13485)	pilA	2699620..2700072 (+)	453	WP_020851240.1	pilin	Machinery gene
D934_RS12515 (D934_13490)	pilB	2700919..2702652 (+)	1734	WP_020851241.1	type IV-A pilus assembly ATPase PilB	Machinery gene
D934_RS12520 (D934_13495)	-	2702746..2704158 (-)	1413	WP_020851242.1	sigma-54 dependent transcriptional regulator	-
D934_RS12525 (D934_13500)	pilS	2704344..2705954 (-)	1611	WP_020851243.1	ATP-binding protein	Regulator
D934_RS12530 (D934_13505)	sucC	2706209..2707372 (+)	1164	WP_004090371.1	ADP-forming succinate--CoA ligase subunit beta	-
D934_RS12535 (D934_13510)	sucD	2707401..2708273 (+)	873	WP_004090370.1	succinate--CoA ligase subunit alpha	-
D934_RS12540 (D934_13515)	-	2708552..2709250 (+)	699	WP_020851244.1	hypothetical protein	-

Sequence

Protein

• Length: 536 a.a.
• Molecular weight: 59095.36 Da
• Isoelectric Point: 6.1390

>NTDB_id=100970 D934_RS12525 WP_020851243.1 2704344..2705954(-) (pilS) [Xylella fastidiosa subsp. sandyi Ann-1]
MLFSASLIHRIEFAPQRELYFLALYRILEAGLIAALVFSPVSLLVDPESDPHLGTAVAVGYLLLATILLVWGRNERWFTP
LVFGSTVADILAATLAIHALPKASAGIAMMLLFNVAAAAILLRLRFSMILAWIAGVAMLVEYIWTVLSEGDSSRSLAELL
MFFTSYTAVAYMCHQAAQRARYSQALAEKRRAQIVNLAEINELIIRRMRTGVLVVDAANRIGLSNETAAALLGYDRQLVE
SDYDLATVAPELTMRLKCWRIGRHYEDTPLRLAPDQPEVQPRFVSLLADSGLTLIFLDDVSVVSRRAESLTLLALGRFSA
SLAHEIRNPLAAIKHASQLLEESSNLDKGDQRLLDIILKQCQRTNGIVESVLGLARRERANPENLDLVGFVSRFVDEYRQ
TLSSEYDNLEIQTLHSTVQALVDPRHLYQILAVLTHNALRYGRFPDTPAQVRIEVVYTGGSVGINVLDQGPGIPDAAVLQ
LFQPFFTTSDHGTGLGLYIARELCNANQSNLEYVAIPGGGACFRITLPGPYALIPN

Nucleotide

• Length: 1611 bp

>NTDB_id=100970 D934_RS12525 WP_020851243.1 2704344..2705954(-) (pilS) [Xylella fastidiosa subsp. sandyi Ann-1]
GTGTTGTTCAGCGCTTCGCTGATTCATCGGATCGAATTTGCCCCGCAGCGTGAACTTTATTTTCTCGCGTTGTATCGGAT
CTTGGAGGCTGGATTGATCGCGGCCCTGGTGTTCAGTCCGGTGTCGCTATTGGTGGATCCTGAGAGTGATCCACATTTGG
GCACGGCTGTCGCTGTCGGTTATTTGCTGTTGGCTACCATTTTGTTGGTCTGGGGTCGTAATGAGCGTTGGTTCACACCA
TTAGTCTTTGGAAGTACTGTCGCCGACATTTTGGCTGCCACTCTTGCTATTCACGCTCTGCCTAAAGCCAGTGCCGGCAT
TGCGATGATGTTGTTGTTTAACGTTGCTGCCGCCGCCATCTTATTGCGGTTGCGTTTCAGCATGATCCTGGCTTGGATTG
CTGGGGTTGCGATGCTTGTGGAATACATCTGGACTGTACTCAGTGAGGGTGACTCCTCACGTTCATTGGCCGAGCTCCTT
ATGTTTTTCACCAGCTACACTGCAGTGGCGTATATGTGTCATCAGGCCGCGCAGCGGGCTAGATATAGCCAAGCTCTGGC
TGAAAAGCGCCGTGCCCAGATAGTCAACTTGGCAGAGATCAATGAGCTGATTATCCGACGTATGCGGACGGGTGTGTTGG
TGGTGGATGCTGCTAATCGAATCGGTTTGAGTAACGAAACTGCAGCTGCGTTGCTGGGATACGACAGACAATTGGTCGAG
AGTGATTACGATCTCGCTACGGTTGCTCCGGAGTTGACAATGCGTCTGAAGTGTTGGCGTATTGGTCGACACTACGAAGA
TACTCCGTTGCGATTAGCACCTGATCAACCTGAGGTTCAGCCTCGCTTTGTGAGTTTGCTTGCCGACAGTGGATTGACAT
TAATTTTCCTTGATGATGTCAGTGTTGTTTCACGCCGTGCCGAATCGTTGACTTTGTTGGCGCTTGGACGTTTTTCAGCC
AGTTTGGCGCACGAGATTCGTAATCCTTTGGCTGCAATTAAACATGCATCGCAGCTGTTGGAAGAGTCCTCCAATCTTGA
CAAAGGCGATCAACGGCTGTTGGACATTATTCTAAAGCAGTGCCAGCGGACCAATGGGATTGTGGAGAGCGTGCTTGGTT
TGGCAAGACGCGAACGTGCTAACCCGGAAAATTTGGATTTGGTCGGTTTTGTGTCCCGATTTGTCGATGAATACCGCCAG
ACATTGTCAAGCGAGTATGACAATCTGGAGATACAAACGTTGCACAGTACCGTGCAGGCACTGGTGGATCCACGCCACTT
GTACCAGATCCTCGCTGTCCTTACCCACAACGCGTTGCGTTATGGCCGCTTTCCGGATACTCCGGCACAGGTGCGTATTG
AGGTGGTATATACCGGAGGCAGCGTGGGGATCAATGTCCTTGATCAGGGGCCTGGTATACCCGATGCGGCTGTTTTGCAG
CTTTTTCAGCCTTTTTTCACTACTTCCGACCATGGTACGGGGCTTGGTCTATATATCGCTCGTGAGCTGTGCAATGCGAA
TCAATCCAATCTTGAGTACGTGGCCATTCCAGGGGGAGGGGCTTGTTTCCGGATTACTTTGCCGGGTCCGTATGCATTGA
TTCCGAATTGA

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (314-378)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (423-528)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	37.833	98.134	0.371