Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ABNQ20_RS02180 Genome accession   NZ_CP158051
Coordinates   466918..467325 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain P1110     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 461918..472325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNQ20_RS02150 (ABNQ20_02145) - 461966..462970 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  ABNQ20_RS02155 (ABNQ20_02150) pyrR 462994..463506 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABNQ20_RS02160 (ABNQ20_02155) ruvX 463618..464052 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ABNQ20_RS02165 (ABNQ20_02160) - 464052..464621 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  ABNQ20_RS02170 (ABNQ20_02165) - 464670..465563 (-) 894 WP_003084580.1 TonB family protein -
  ABNQ20_RS02175 (ABNQ20_02170) gshB 465710..466663 (-) 954 WP_003100943.1 glutathione synthase -
  ABNQ20_RS02180 (ABNQ20_02175) pilG 466918..467325 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ABNQ20_RS02185 (ABNQ20_02180) pilH 467372..467737 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  ABNQ20_RS02190 (ABNQ20_02185) - 467788..468324 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ABNQ20_RS02195 (ABNQ20_02190) - 468601..468915 (-) 315 WP_000349485.1 helix-turn-helix domain-containing protein -
  ABNQ20_RS02200 (ABNQ20_02195) - 469057..470061 (+) 1005 WP_040363373.1 permease -
  ABNQ20_RS02205 (ABNQ20_02200) - 470074..471351 (+) 1278 WP_000610830.1 ISL3 family transposase -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1009686 ABNQ20_RS02180 WP_003084583.1 466918..467325(+) (pilG) [Pseudomonas aeruginosa strain P1110]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1009686 ABNQ20_RS02180 WP_003084583.1 466918..467325(+) (pilG) [Pseudomonas aeruginosa strain P1110]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment