Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ABNG15_RS02065 Genome accession   NZ_CP158022
Coordinates   441594..442001 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain CI00795     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 436594..447001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNG15_RS02035 (ABNG15_02035) - 436642..437646 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  ABNG15_RS02040 (ABNG15_02040) pyrR 437670..438182 (-) 513 WP_023097137.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABNG15_RS02045 (ABNG15_02045) ruvX 438294..438728 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ABNG15_RS02050 (ABNG15_02050) - 438728..439297 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  ABNG15_RS02055 (ABNG15_02055) - 439346..440239 (-) 894 WP_003084580.1 TonB family protein -
  ABNG15_RS02060 (ABNG15_02060) gshB 440386..441339 (-) 954 WP_003100943.1 glutathione synthase -
  ABNG15_RS02065 (ABNG15_02065) pilG 441594..442001 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ABNG15_RS02070 (ABNG15_02070) pilH 442048..442413 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  ABNG15_RS02075 (ABNG15_02075) - 442464..443000 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ABNG15_RS02080 (ABNG15_02080) pilJ 443085..445133 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  ABNG15_RS02085 (ABNG15_02085) pilK 445194..446068 (+) 875 Protein_415 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1009536 ABNG15_RS02065 WP_003084583.1 441594..442001(+) (pilG) [Pseudomonas aeruginosa strain CI00795]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1009536 ABNG15_RS02065 WP_003084583.1 441594..442001(+) (pilG) [Pseudomonas aeruginosa strain CI00795]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment