Detailed information NTG1009475

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABJ384_RS08395
• Genome accession: NZ_CP157981
• Coordinates: 1701034..1701717 (-)
• Length: 227 a.a.
• NCBI ID: WP_349926713.1
• Uniprot ID: A0AAU7SU48
• Organism: Acinetobacter sp. A1-4-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1696034..1706717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABJ384_RS08365 (ABJ384_08355)	-	1696401..1696832 (-)	432	WP_166168897.1	SRPBCC family protein	-
ABJ384_RS08370 (ABJ384_08360)	tadA	1696891..1697412 (-)	522	WP_180080322.1	tRNA adenosine(34) deaminase TadA	-
ABJ384_RS08375 (ABJ384_08365)	-	1697417..1698541 (-)	1125	WP_349926709.1	enoyl-CoA hydratase/isomerase family protein	-
ABJ384_RS08380 (ABJ384_08370)	ung	1698538..1699251 (-)	714	WP_086195473.1	uracil-DNA glycosylase	-
ABJ384_RS08385 (ABJ384_08375)	-	1699299..1699895 (-)	597	WP_349926711.1	6-carboxytetrahydropterin synthase	-
ABJ384_RS08390 (ABJ384_08380)	gspK	1700068..1701015 (-)	948	WP_349929723.1	type II secretion system minor pseudopilin GspK	-
ABJ384_RS08395 (ABJ384_08385)	xcpW	1701034..1701717 (-)	684	WP_349926713.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABJ384_RS08400 (ABJ384_08390)	xcpV	1701714..1702154 (-)	441	WP_349926715.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABJ384_RS08405 (ABJ384_08395)	-	1702144..1702704 (-)	561	WP_349926717.1	type II secretion system protein	-
ABJ384_RS08410 (ABJ384_08400)	-	1702723..1703328 (-)	606	WP_349926719.1	TetR/AcrR family transcriptional regulator	-
ABJ384_RS08415 (ABJ384_08405)	-	1703374..1704147 (-)	774	WP_349926721.1	TatD family hydrolase	-
ABJ384_RS08420 (ABJ384_08410)	-	1704174..1704515 (-)	342	WP_349926722.1	PilZ domain-containing protein	-
ABJ384_RS08425 (ABJ384_08415)	-	1704537..1705520 (-)	984	WP_349926724.1	DNA polymerase III subunit delta'	-
ABJ384_RS08430 (ABJ384_08420)	kdsB	1705534..1706295 (-)	762	WP_166168881.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 25784.20 Da
• Isoelectric Point: 7.0188

>NTDB_id=1009475 ABJ384_RS08395 WP_349926713.1 1701034..1701717(-) (xcpW) [Acinetobacter sp. A1-4-2]
MKKQTAKNKKGFTLVELLVAIAIFSVLSALGWKVFDYLIKVKDRNAEHEINLGQLQEAYQQILRDTVQVVPLNANINGDI
QPALVLQNGRFNFSKTGVTDPLQQGISPDERVEYQYRADEKKLYRLKYRNLNSTGRDQPESSVLLNDVDQFEIVVLNPNE
LNAWPEGQVDLNDVTQKQILPKGIKIKLTVKDVSYEWIFSLLNTDYLKQQTGTSNNNANSNTNNSTL

Nucleotide

• Length: 684 bp

>NTDB_id=1009475 ABJ384_RS08395 WP_349926713.1 1701034..1701717(-) (xcpW) [Acinetobacter sp. A1-4-2]
ATGAAAAAGCAGACTGCAAAAAATAAAAAAGGTTTCACTTTGGTTGAACTTTTGGTGGCAATTGCCATCTTTAGTGTGCT
TTCCGCGTTGGGCTGGAAAGTCTTTGATTATTTAATTAAAGTCAAAGACCGTAATGCTGAACATGAGATCAATTTGGGTC
AGCTGCAGGAAGCCTACCAGCAGATTCTGCGTGACACCGTTCAGGTTGTGCCACTGAATGCCAATATCAATGGCGATATT
CAGCCAGCTTTGGTTTTGCAAAATGGTCGATTTAATTTTAGTAAAACTGGGGTCACTGATCCTTTACAGCAAGGTATTTC
TCCGGACGAGCGTGTGGAATATCAATATCGTGCCGATGAAAAGAAACTGTACCGACTGAAATACCGTAATTTAAACAGTA
CAGGGCGGGATCAGCCTGAATCCAGTGTACTGTTAAATGATGTTGACCAGTTTGAAATTGTGGTGTTGAATCCGAATGAA
CTCAATGCATGGCCAGAGGGGCAGGTAGATTTAAACGATGTTACACAAAAACAGATCTTGCCGAAGGGCATTAAAATTAA
ACTGACCGTCAAAGATGTGTCCTATGAGTGGATTTTTAGTTTATTAAATACCGATTATTTAAAACAGCAAACTGGCACTT
CAAATAACAATGCAAATAGCAATACAAATAACTCTACATTATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (64-195)

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	62.255	89.868	0.559