Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABK447_RS18755 Genome accession   NZ_CP157943
Coordinates   3724295..3725248 (-) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus sp. hwrm1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3719295..3730248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABK447_RS18735 (ABK447_18715) - 3720174..3721598 (+) 1425 WP_094031503.1 MDR family MFS transporter -
  ABK447_RS18740 (ABK447_18720) - 3721640..3722584 (-) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  ABK447_RS18745 (ABK447_18725) - 3722606..3723364 (-) 759 WP_349909111.1 ABC transporter ATP-binding protein -
  ABK447_RS18750 (ABK447_18730) - 3723358..3724305 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  ABK447_RS18755 (ABK447_18735) ceuB 3724295..3725248 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  ABK447_RS18760 (ABK447_18740) - 3725662..3727026 (+) 1365 WP_124934871.1 aspartate kinase -
  ABK447_RS18765 (ABK447_18745) - 3727106..3727216 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  ABK447_RS18770 (ABK447_18750) phrC 3727365..3727484 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ABK447_RS18775 (ABK447_18755) rapC 3727468..3728616 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  ABK447_RS18780 (ABK447_18760) - 3728769..3730202 (-) 1434 WP_162303988.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=1009215 ABK447_RS18755 WP_059366593.1 3724295..3725248(-) (ceuB) [Bacillus sp. hwrm1]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1009215 ABK447_RS18755 WP_059366593.1 3724295..3725248(-) (ceuB) [Bacillus sp. hwrm1]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATTCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATAGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment