Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ABKA15_RS03280 Genome accession   NZ_CP157941
Coordinates   666754..667557 (+) Length   267 a.a.
NCBI ID   WP_049513492.1    Uniprot ID   A0A7L8W6F6
Organism   Streptococcus sp. KHUD_010     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 661754..672557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS03260 (ABKA15_03255) - 662741..664054 (+) 1314 WP_106388374.1 glycosyltransferase family 4 protein -
  ABKA15_RS03265 (ABKA15_03260) - 664081..664422 (+) 342 WP_106388375.1 hypothetical protein -
  ABKA15_RS03270 (ABKA15_03265) micA 664706..665407 (+) 702 WP_049513494.1 response regulator YycF Regulator
  ABKA15_RS03275 (ABKA15_03270) micB 665400..666752 (+) 1353 WP_022526267.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ABKA15_RS03280 (ABKA15_03275) vicX 666754..667557 (+) 804 WP_049513492.1 MBL fold metallo-hydrolase Regulator
  ABKA15_RS03285 (ABKA15_03280) - 667566..667925 (+) 360 WP_049513490.1 DUF454 family protein -
  ABKA15_RS03290 (ABKA15_03285) rnc 668311..669009 (+) 699 WP_049513488.1 ribonuclease III -
  ABKA15_RS03295 (ABKA15_03290) smc 669000..672533 (+) 3534 WP_049513485.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29895.87 Da        Isoelectric Point: 6.0342

>NTDB_id=1009111 ABKA15_RS03280 WP_049513492.1 666754..667557(+) (vicX) [Streptococcus sp. KHUD_010]
MNEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMINQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1009111 ABKA15_RS03280 WP_049513492.1 666754..667557(+) (vicX) [Streptococcus sp. KHUD_010]
ATGAACGAGAAGGGATTTAAGTACAGTATTTTAGCGTCAGGTTCTACTGGCAATTGTTTCTATTTAGAAACCCCAAAGAA
GAAGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAAATTGACCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTTAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCACCGCAATTTT
ACCGACTGATGAAAGACGATAAAAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCGGGGATTATT
GAAAATGCGGACGGGTATTTGATCGAGTCCAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGCCTGAA
GCAGCGGATTTTATCTGACCAAGGCCATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGGCATCTTAGCAAAGAAAATAATACCAAAGAATTGGCTCATATCACAATGATCAATCAATTA
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACAGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W6F6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment