Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | N837_RS03155 | Genome accession | NZ_CP006689 |
| Coordinates | 597412..597795 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 592412..602795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N837_RS03135 (N920_03155) | - | 592491..594425 (-) | 1935 | WP_010891871.1 | ribonuclease R family protein | - |
| N837_RS03140 (N920_03160) | ilvC | 594544..595566 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| N837_RS03145 (N920_03165) | - | 595570..596652 (+) | 1083 | WP_002873647.1 | divergent polysaccharide deacetylase family protein | - |
| N837_RS03150 (N920_03170) | dprA | 596642..597415 (+) | 774 | WP_002874287.1 | DNA-processing protein DprA | Machinery gene |
| N837_RS03155 (N920_03175) | dprB | 597412..597795 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| N837_RS03160 (N920_03180) | - | 597824..598663 (+) | 840 | WP_010891872.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| N837_RS03165 (N920_03185) | msrA | 598839..599336 (-) | 498 | WP_002858555.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| N837_RS03170 (N920_03190) | ppa | 599377..599895 (-) | 519 | WP_002858521.1 | inorganic diphosphatase | - |
| N837_RS03175 (N920_03195) | adk | 599905..600483 (-) | 579 | WP_002858481.1 | adenylate kinase | - |
| N837_RS03180 (N920_03200) | aspS | 600480..602231 (-) | 1752 | WP_002871806.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=100874 N837_RS03155 WP_002852281.1 597412..597795(+) (dprB) [Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=100874 N837_RS03155 WP_002852281.1 597412..597795(+) (dprB) [Campylobacter jejuni subsp. jejuni NCTC 11168-GSv strain NCTC 11168-rNRC]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |