Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ABNP42_RS17215 | Genome accession | NZ_CP157868 |
| Coordinates | 3329552..3330610 (-) | Length | 352 a.a. |
| NCBI ID | WP_094910794.1 | Uniprot ID | - |
| Organism | Priestia flexa strain Antcr29 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3324552..3335610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNP42_RS17170 (ABNP42_17140) | - | 3324754..3325575 (+) | 822 | WP_094910785.1 | YqhG family protein | - |
| ABNP42_RS17175 (ABNP42_17145) | - | 3325613..3325804 (-) | 192 | WP_094910786.1 | YqzE family protein | - |
| ABNP42_RS17180 (ABNP42_17150) | - | 3325949..3326575 (+) | 627 | WP_131888291.1 | cupin domain-containing protein | - |
| ABNP42_RS17185 (ABNP42_17155) | comGG | 3326626..3327045 (-) | 420 | WP_094910788.1 | competence type IV pilus minor pilin ComGG | - |
| ABNP42_RS17190 (ABNP42_17160) | comGF | 3327008..3327436 (-) | 429 | WP_094910789.1 | competence type IV pilus minor pilin ComGF | - |
| ABNP42_RS17195 (ABNP42_17165) | - | 3327433..3327768 (-) | 336 | WP_094910790.1 | type II secretion system protein | - |
| ABNP42_RS17200 (ABNP42_17170) | comGD | 3327752..3328222 (-) | 471 | WP_247600456.1 | competence type IV pilus minor pilin ComGD | - |
| ABNP42_RS17205 (ABNP42_17175) | comGC | 3328188..3328499 (-) | 312 | WP_094910792.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABNP42_RS17210 (ABNP42_17180) | comGB | 3328513..3329505 (-) | 993 | WP_256993311.1 | competence type IV pilus assembly protein ComGB | - |
| ABNP42_RS17215 (ABNP42_17185) | comGA | 3329552..3330610 (-) | 1059 | WP_094910794.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABNP42_RS17220 (ABNP42_17190) | - | 3330819..3331202 (-) | 384 | WP_094910795.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| ABNP42_RS17225 (ABNP42_17195) | - | 3331497..3331736 (+) | 240 | WP_094910796.1 | DUF2626 domain-containing protein | - |
| ABNP42_RS17230 (ABNP42_17200) | - | 3331780..3332412 (-) | 633 | WP_350019614.1 | MBL fold metallo-hydrolase | - |
| ABNP42_RS17235 (ABNP42_17205) | - | 3332609..3332782 (+) | 174 | WP_025911564.1 | DUF2759 domain-containing protein | - |
| ABNP42_RS17240 (ABNP42_17210) | - | 3332837..3333742 (-) | 906 | WP_350019615.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 39700.82 Da Isoelectric Point: 8.8234
>NTDB_id=1008584 ABNP42_RS17215 WP_094910794.1 3329552..3330610(-) (comGA) [Priestia flexa strain Antcr29]
MNEIEQLATRMIGEACEMKSSDIHIIPRARDAIVQLRVDQDLVAHQTLPKDVSERLISHFKFLGSMDIGERRKPQNGALS
TTINHIKVNLRLSTLPTSQDESLVIRVLPQTQTTSLKHLSLFQNHTKKLISLLKHSHGLIVFTGPTGSGKTTTLYTLLHE
VKHLLNRNVITLEDPIEQQSEKVLQVQVNERAGITYATGLKAILRHDPDIIMVGEIRDAETAQIAVRAALTGHLVLTTMH
TKDTKGSIYRLLEFGVSIQEIEQTLVAVAAQRLVEIKCNFCEGKCHPLCKRERLNRQASVYELLYGREVNQVLNEVKGKE
FQYEYARLRDAIRKGIALGYLYSHALDGWGSY
MNEIEQLATRMIGEACEMKSSDIHIIPRARDAIVQLRVDQDLVAHQTLPKDVSERLISHFKFLGSMDIGERRKPQNGALS
TTINHIKVNLRLSTLPTSQDESLVIRVLPQTQTTSLKHLSLFQNHTKKLISLLKHSHGLIVFTGPTGSGKTTTLYTLLHE
VKHLLNRNVITLEDPIEQQSEKVLQVQVNERAGITYATGLKAILRHDPDIIMVGEIRDAETAQIAVRAALTGHLVLTTMH
TKDTKGSIYRLLEFGVSIQEIEQTLVAVAAQRLVEIKCNFCEGKCHPLCKRERLNRQASVYELLYGREVNQVLNEVKGKE
FQYEYARLRDAIRKGIALGYLYSHALDGWGSY
Nucleotide
Download Length: 1059 bp
>NTDB_id=1008584 ABNP42_RS17215 WP_094910794.1 3329552..3330610(-) (comGA) [Priestia flexa strain Antcr29]
TTGAACGAAATTGAACAATTAGCCACCCGCATGATTGGTGAAGCATGTGAGATGAAGAGCTCAGACATTCACATTATTCC
TCGAGCTAGAGATGCCATAGTTCAGCTAAGGGTTGATCAAGATTTAGTGGCTCATCAAACGCTCCCAAAAGATGTATCTG
AACGACTTATCTCCCATTTTAAATTTTTAGGAAGCATGGATATTGGTGAAAGACGCAAGCCTCAAAATGGTGCACTGTCT
ACAACAATTAATCACATCAAAGTTAATCTGCGTTTATCCACTTTACCTACATCGCAGGATGAAAGTCTCGTTATTCGTGT
ATTACCCCAAACACAAACAACTTCTCTTAAACACTTATCACTTTTTCAAAATCATACAAAAAAACTTATTTCGCTGCTTA
AGCATTCACATGGTTTAATTGTGTTTACTGGGCCGACGGGATCTGGTAAAACAACGACTTTATATACGCTACTTCATGAG
GTTAAACATTTGTTAAATCGCAATGTCATTACGCTTGAAGATCCGATTGAACAGCAGAGCGAAAAAGTCCTGCAGGTACA
GGTCAACGAACGAGCTGGTATTACGTATGCAACGGGATTAAAAGCAATTTTACGTCATGATCCTGATATTATTATGGTCG
GTGAAATTCGTGACGCTGAAACAGCTCAAATCGCGGTTCGTGCAGCCTTAACCGGTCATCTAGTGTTGACAACTATGCAT
ACAAAAGATACAAAAGGCTCTATTTATCGGTTGCTTGAGTTTGGTGTTAGTATTCAAGAAATTGAACAAACGTTGGTAGC
TGTAGCTGCGCAGCGATTGGTCGAAATAAAATGTAATTTCTGTGAAGGGAAATGTCATCCACTATGTAAGAGAGAGCGTT
TAAATAGACAGGCAAGCGTGTATGAGCTTCTATATGGGAGAGAAGTAAATCAAGTACTCAATGAAGTGAAAGGAAAGGAG
TTTCAATATGAATATGCACGACTAAGAGATGCAATTCGAAAAGGTATTGCGCTTGGCTATTTATATTCACATGCGCTAGA
TGGGTGGGGGTCCTATTAA
TTGAACGAAATTGAACAATTAGCCACCCGCATGATTGGTGAAGCATGTGAGATGAAGAGCTCAGACATTCACATTATTCC
TCGAGCTAGAGATGCCATAGTTCAGCTAAGGGTTGATCAAGATTTAGTGGCTCATCAAACGCTCCCAAAAGATGTATCTG
AACGACTTATCTCCCATTTTAAATTTTTAGGAAGCATGGATATTGGTGAAAGACGCAAGCCTCAAAATGGTGCACTGTCT
ACAACAATTAATCACATCAAAGTTAATCTGCGTTTATCCACTTTACCTACATCGCAGGATGAAAGTCTCGTTATTCGTGT
ATTACCCCAAACACAAACAACTTCTCTTAAACACTTATCACTTTTTCAAAATCATACAAAAAAACTTATTTCGCTGCTTA
AGCATTCACATGGTTTAATTGTGTTTACTGGGCCGACGGGATCTGGTAAAACAACGACTTTATATACGCTACTTCATGAG
GTTAAACATTTGTTAAATCGCAATGTCATTACGCTTGAAGATCCGATTGAACAGCAGAGCGAAAAAGTCCTGCAGGTACA
GGTCAACGAACGAGCTGGTATTACGTATGCAACGGGATTAAAAGCAATTTTACGTCATGATCCTGATATTATTATGGTCG
GTGAAATTCGTGACGCTGAAACAGCTCAAATCGCGGTTCGTGCAGCCTTAACCGGTCATCTAGTGTTGACAACTATGCAT
ACAAAAGATACAAAAGGCTCTATTTATCGGTTGCTTGAGTTTGGTGTTAGTATTCAAGAAATTGAACAAACGTTGGTAGC
TGTAGCTGCGCAGCGATTGGTCGAAATAAAATGTAATTTCTGTGAAGGGAAATGTCATCCACTATGTAAGAGAGAGCGTT
TAAATAGACAGGCAAGCGTGTATGAGCTTCTATATGGGAGAGAAGTAAATCAAGTACTCAATGAAGTGAAAGGAAAGGAG
TTTCAATATGAATATGCACGACTAAGAGATGCAATTCGAAAAGGTATTGCGCTTGGCTATTTATATTCACATGCGCTAGA
TGGGTGGGGGTCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
59.714 |
99.432 |
0.594 |