Detailed information NTG1008362

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABNF92_RS06680
• Genome accession: NZ_CP157802
• Coordinates: 1443563..1444951 (+)
• Length: 462 a.a.
• NCBI ID: WP_349343776.1
• Uniprot ID: A0AAU7MR23
• Organism: Marinobacter sp. MMG032
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1438563..1449951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNF92_RS06665 (ABNF92_06665)	-	1439200..1440033 (+)	834	WP_153634737.1	outer membrane protein assembly factor BamD	-
ABNF92_RS06670 (ABNF92_06670)	-	1440086..1441756 (-)	1671	WP_349343774.1	NAD+ synthase	-
ABNF92_RS06675 (ABNF92_06675)	-	1441850..1443505 (+)	1656	WP_349343775.1	ATP-binding protein	-
ABNF92_RS06680 (ABNF92_06680)	pilR	1443563..1444951 (+)	1389	WP_349343776.1	sigma-54 dependent transcriptional regulator	Regulator
ABNF92_RS06685 (ABNF92_06685)	-	1445082..1445645 (+)	564	WP_349343777.1	GspH/FimT family pseudopilin	-
ABNF92_RS06690 (ABNF92_06690)	-	1445669..1446088 (-)	420	WP_349343778.1	type IV pilin protein	-
ABNF92_RS06695 (ABNF92_06695)	-	1446085..1449492 (-)	3408	WP_349343779.1	PilC/PilY family type IV pilus protein	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50974.27 Da
• Isoelectric Point: 5.1105

>NTDB_id=1008362 ABNF92_RS06680 WP_349343776.1 1443563..1444951(+) (pilR) [Marinobacter sp. MMG032]
MTTYTALIVDDEPDIRDLLEITLTRMGITTLKAPDLTSARKLLEQNTTHLCLTDMNLPDGNGIELVQWIQKHSPATPVAV
ITAYGNMDTGIESLKAGAFDFVSKPVELPRLRELVNSALKLAEPKADTEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELIVPPLRERPDDIPLLA
HHILERIANEYECAPASLTPKAVERLRDYDFPGNVRELENVLERAFTLCDADQIGTDDLHLGNGVQHAASATQIIAEGQS
GEGEQIAVPDGKIDLEGYLEEIERQAIEKALDATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1389 bp

>NTDB_id=1008362 ABNF92_RS06680 WP_349343776.1 1443563..1444951(+) (pilR) [Marinobacter sp. MMG032]
ATGACCACATACACAGCGCTGATCGTTGATGATGAACCGGACATCCGGGATCTACTTGAGATCACCCTCACACGGATGGG
GATAACCACGCTCAAGGCACCTGATCTCACGAGCGCCCGAAAATTGCTGGAACAAAACACCACCCATCTTTGCCTGACCG
ACATGAACCTGCCAGACGGTAACGGCATCGAACTCGTACAGTGGATTCAGAAGCATTCTCCCGCCACGCCTGTTGCTGTG
ATTACAGCCTACGGCAACATGGATACTGGGATTGAGTCTCTCAAAGCCGGGGCTTTTGATTTCGTATCCAAGCCGGTGGA
ACTGCCCCGTTTAAGGGAGTTGGTCAATAGCGCCCTCAAATTAGCCGAGCCAAAGGCAGACACAGAAGATACAGCCGACG
AGCCAGGCCTGTTACTGGGTAAATCGCCAGAGATACGCAAACTCCGTAACCAGACCCGAAAACTGGCCAGAAGCCAGGCG
CCCGTTTTTATCAGCGGCGAGTCCGGCAGCGGTAAGGAACTGGTTGCCAGAATGATCCATCTGCAGGGACCCCGCCGCGA
AGGACCATTCATCGCGGTTAACTGCGGCGCGATTCCCTCAGAGCTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCA
GCTTTACCGGAGCCGTGGAGAATAAAGACGGCTTGTTCCGTTCGGCCAACGGCGGCACCTTATTCCTTGATGAAGTGGCC
GACCTCCCCCTTGCCATGCAGGTGAAACTGCTCCGGGCTATCCAGGAAAAGGCAGTTCGTCCGGTTGGCGATACCAAAGA
GGTGCCCGTGGACATCCGGGTACTGAGTGCCACCCATAAGAACCTGCCGGAACTGGTTCAGGAAGGCAGCTTCCGTCAGG
ATCTTTTCTACCGAATTAATGTGATCGAGCTAATTGTACCGCCCTTGAGAGAGAGACCTGATGACATTCCCCTGCTTGCA
CATCACATTCTTGAGAGGATTGCGAATGAATATGAATGTGCACCCGCCTCGTTAACGCCAAAGGCCGTCGAACGGCTGAG
AGACTATGATTTTCCCGGCAACGTCAGGGAGCTAGAGAATGTATTGGAGCGGGCCTTTACCCTTTGCGACGCCGACCAAA
TTGGCACTGACGATCTCCACTTGGGGAATGGCGTACAGCATGCAGCCTCCGCCACACAGATCATTGCGGAAGGACAATCT
GGTGAGGGAGAGCAGATCGCTGTGCCTGATGGTAAAATCGATCTGGAAGGATACCTCGAGGAAATTGAGCGGCAGGCAAT
TGAAAAGGCACTTGACGCGACGCGGTGGAACAAAACGGCTGCTGCGAAACGGTTGGGGATTAGTTTTCGGGCACTTAGAT
ACCGATTAAAAAAACTGGGTATGGAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.715	100	0.639
pilR	Acinetobacter baumannii strain A118	53.261	99.567	0.53