Detailed information NTG1007714

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABL851_RS31545
• Genome accession: NZ_CP157614
• Coordinates: 6686722..6687978 (-)
• Length: 418 a.a.
• NCBI ID: WP_093304228.1
• Uniprot ID: -
• Organism: Variovorax sp. NFACC26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6681722..6692978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL851_RS31525 (ABL851_31475)	rpoH	6682278..6683219 (-)	942	WP_093206681.1	RNA polymerase sigma factor RpoH	-
ABL851_RS31530 (ABL851_31480)	-	6683318..6683782 (-)	465	WP_093304234.1	DUF962 domain-containing protein	-
ABL851_RS31535 (ABL851_31485)	-	6683968..6684699 (+)	732	WP_093304232.1	response regulator transcription factor	-
ABL851_RS31540 (ABL851_31490)	-	6684696..6686492 (+)	1797	WP_418116093.1	ATP-binding protein	-
ABL851_RS31545 (ABL851_31495)	pilA	6686722..6687978 (-)	1257	WP_093304228.1	signal recognition particle-docking protein FtsY	Machinery gene
ABL851_RS31550 (ABL851_31500)	-	6688008..6689459 (+)	1452	WP_371287212.1	M16 family metallopeptidase	-
ABL851_RS31555 (ABL851_31505)	-	6689474..6690853 (+)	1380	WP_093304226.1	M16 family metallopeptidase	-
ABL851_RS31560 (ABL851_31510)	-	6690985..6691899 (-)	915	WP_093206686.1	LysR family transcriptional regulator ArgP	-
ABL851_RS31565 (ABL851_31515)	-	6691978..6692616 (+)	639	WP_093206687.1	LysE/ArgO family amino acid transporter	-

Sequence

Protein

• Length: 418 a.a.
• Molecular weight: 43338.02 Da
• Isoelectric Point: 5.5535

>NTDB_id=1007714 ABL851_RS31545 WP_093304228.1 6686722..6687978(-) (pilA) [Variovorax sp. NFACC26]
MFSFFKKKPPAETPDAPASTPPAPAAPAPEPAPARSVFSPSSWFGSKPTVEETPAPPPAPALAPVAAPAPAPVPSPAPAP
APAPVASPAPVPVSAPPVAAPVPAPAPVVAPIAEPVIATERKGWFDKLKTGLRKTGTGIQAVFVNAKIDEALYEELESAL
LMADTGVKATEYLLDDLRGRVKRQMATDASQVKALLAETVADLLRPLEKPLVIGQFTPTVIMVAGVNGAGKTTSIGKLTK
HLADEGASVLLAAADTFRAAAREQLLVWADRNTVEIVSQEGGDPSAVSFDAVNAGKARGKDVVLVDTAGRLPTQLHLMDE
LKKIKRVVTKADGTAPHEVLLVIDGNTGQNALAQVKAFDETLGLTGLVVTKLDGTAKGGVLCAIARERPIPVYFIGVGEK
LEDLETFNAREFAQALLG

Nucleotide

• Length: 1257 bp

>NTDB_id=1007714 ABL851_RS31545 WP_093304228.1 6686722..6687978(-) (pilA) [Variovorax sp. NFACC26]
ATGTTCAGTTTCTTCAAGAAAAAACCGCCTGCCGAAACCCCCGATGCGCCGGCGTCCACCCCGCCGGCCCCGGCGGCGCC
TGCCCCGGAGCCCGCGCCGGCGCGCTCGGTGTTCTCGCCTTCGAGCTGGTTCGGCTCGAAGCCGACGGTGGAAGAAACGC
CTGCCCCGCCACCCGCACCCGCTCTCGCACCCGTTGCAGCACCGGCACCGGCGCCAGTGCCTTCGCCAGCTCCTGCGCCG
GCCCCCGCACCGGTTGCATCGCCCGCTCCAGTCCCTGTTTCCGCTCCCCCGGTTGCCGCCCCCGTTCCGGCGCCAGCGCC
GGTCGTCGCTCCGATTGCCGAACCCGTCATCGCCACCGAGCGCAAGGGCTGGTTCGACAAGCTCAAGACCGGCCTGCGCA
AGACCGGCACCGGCATCCAGGCCGTGTTCGTCAACGCGAAGATCGACGAGGCACTGTACGAAGAACTCGAATCCGCCCTG
CTGATGGCCGACACCGGCGTGAAGGCGACCGAATACCTGCTCGACGACCTGCGCGGCCGGGTCAAGCGCCAGATGGCCAC
CGACGCCTCGCAAGTCAAGGCCCTGCTGGCCGAGACGGTGGCCGACCTGCTACGCCCGCTCGAGAAGCCGCTGGTCATCG
GCCAGTTCACGCCCACCGTGATCATGGTGGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAG
CACCTGGCCGACGAAGGCGCCTCGGTGCTGCTGGCCGCGGCCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTGCTGGT
CTGGGCCGACCGCAACACCGTGGAGATCGTGAGCCAGGAAGGCGGCGACCCGTCGGCCGTGAGCTTCGACGCGGTGAACG
CCGGCAAGGCGCGCGGCAAGGACGTGGTGCTGGTCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGACGAG
CTGAAGAAGATCAAGCGCGTCGTCACCAAGGCCGACGGCACCGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAACAC
CGGCCAGAACGCCCTGGCGCAGGTCAAGGCCTTCGACGAGACGCTGGGCCTCACGGGCCTGGTCGTGACCAAGCTCGACG
GCACGGCCAAGGGCGGCGTGCTGTGCGCCATCGCGCGGGAAAGGCCGATTCCGGTCTATTTCATCGGCGTGGGCGAAAAG
CTGGAAGACCTGGAAACCTTCAACGCCCGCGAATTCGCGCAGGCACTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (218-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (136-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.821	100	0.495