Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABKJ27_RS01195 Genome accession   NZ_CP157578
Coordinates   226319..227578 (+) Length   419 a.a.
NCBI ID   WP_410011869.1    Uniprot ID   -
Organism   Streptococcus sp. KHUD_011     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 221319..232578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ27_RS01165 (ABKJ27_01170) - 221473..221889 (+) 417 WP_084928775.1 GNAT family N-acetyltransferase -
  ABKJ27_RS01170 (ABKJ27_01175) - 222613..222705 (-) 93 WP_000970296.1 type I toxin-antitoxin system Fst family toxin -
  ABKJ27_RS01175 (ABKJ27_01180) ruvB 222839..223837 (+) 999 WP_023946759.1 Holliday junction branch migration DNA helicase RuvB -
  ABKJ27_RS01180 (ABKJ27_01185) - 223818..224390 (+) 573 WP_410011867.1 nucleotidyltransferase family protein -
  ABKJ27_RS01185 (ABKJ27_01190) - 224727..225485 (+) 759 WP_049501812.1 isoprenyl transferase -
  ABKJ27_RS01190 (ABKJ27_01195) - 225494..226297 (+) 804 WP_410011868.1 phosphatidate cytidylyltransferase -
  ABKJ27_RS01195 (ABKJ27_01200) eeP 226319..227578 (+) 1260 WP_410011869.1 RIP metalloprotease RseP Regulator
  ABKJ27_RS01200 (ABKJ27_01205) - 227591..229444 (+) 1854 WP_410011870.1 proline--tRNA ligase -
  ABKJ27_RS01205 (ABKJ27_01210) bglA 229543..230922 (+) 1380 WP_410011871.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45846.48 Da        Isoelectric Point: 5.7121

>NTDB_id=1007434 ABKJ27_RS01195 WP_410011869.1 226319..227578(+) (eeP) [Streptococcus sp. KHUD_011]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVETETKDKTAPTLDVTISENGSDKQVTVTPEESQGRYLLGVQPGIKSDFLSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAVISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1007434 ABKJ27_RS01195 WP_410011869.1 226319..227578(+) (eeP) [Streptococcus sp. KHUD_011]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGACATTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGTATGGGTCCCAAAATCTTTGCTCACATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTTCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACTCCTGTCAGTTTGACTCTTGCTGATGATGGTAAGGTTAAGCGCATCAATCTTTCAGGTAAAAAATTGGATCAAAC
AGCTCTTCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAGGGCTTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGGAAACTCATTACTAATTTTGCAGGCCCTATGAACAACTTTATCTTAGGTGTCGTTGTTTT
CTGGATTTTAATCTTCATGCAGGGTGGTGTCAGAGATGTCGATACCAACCAGTTCCATATTATGCCCCAAGGGGCCTTGG
CTAAGGTGGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGTTTGATTCAG
GCCGTGGAAACAGAAACCAAAGATAAGACGGCTCCGACCTTGGATGTGACTATTTCTGAAAATGGTAGTGACAAACAAGT
AACGGTTACCCCAGAAGAAAGTCAAGGGCGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCAGCTCTCCGAATTCTCTCAGCCCTTAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGCTAGGTGGCCCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAGTGATTTCTATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCTTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCTATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACCTGGAATGACATCATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.048

100

0.642

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment