Detailed information
Bioinformatically predicted
Overview
| Name | MMJJ_RS05685 | Type | Machinery gene |
| Locus tag | Mjas_RS03685 | Genome accession | NZ_CP157522 |
| Coordinates | 715215..715442 (-) | Length | 75 a.a. |
| NCBI ID | WP_421078418.1 | Uniprot ID | - |
| Organism | Methanothermococcus sp. Ax23 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 710215..720442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Mjas_RS03660 (Mjas_03650) | fni | 710537..711601 (+) | 1065 | WP_421078413.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| Mjas_RS03665 (Mjas_03655) | - | 711767..713113 (+) | 1347 | WP_421078414.1 | RNase J family beta-CASP ribonuclease | - |
| Mjas_RS03670 (Mjas_03660) | - | 713226..714185 (+) | 960 | WP_421078415.1 | polyprenyl synthetase family protein | - |
| Mjas_RS03675 (Mjas_03665) | comD | 714237..714755 (-) | 519 | WP_421078416.1 | sulfopyruvate decarboxylase subunit alpha | - |
| Mjas_RS03680 (Mjas_03670) | - | 714937..715170 (-) | 234 | WP_421078417.1 | class III signal peptide-containing protein | - |
| Mjas_RS03685 (Mjas_03675) | MMJJ_RS05685 | 715215..715442 (-) | 228 | WP_421078418.1 | class III signal peptide-containing protein | Machinery gene |
| Mjas_RS03695 (Mjas_03685) | mfnE | 715775..716437 (+) | 663 | WP_421078419.1 | [5-(aminomethyl)furan-3-yl]methyl phosphate kinase | - |
| Mjas_RS03700 (Mjas_03690) | - | 716473..716637 (+) | 165 | WP_421078420.1 | zinc finger domain-containing protein | - |
| Mjas_RS03705 (Mjas_03695) | - | 716696..716965 (+) | 270 | WP_421078421.1 | elongation factor 1-beta | - |
| Mjas_RS03710 (Mjas_03700) | - | 717042..717266 (+) | 225 | WP_421078422.1 | hypothetical protein | - |
| Mjas_RS03715 (Mjas_03705) | - | 717359..717820 (+) | 462 | WP_421078423.1 | 50S ribosomal protein L22 | - |
| Mjas_RS03720 (Mjas_03710) | - | 717857..718489 (+) | 633 | WP_421078424.1 | 30S ribosomal protein S3 | - |
| Mjas_RS03725 (Mjas_03715) | rpmC | 718588..718800 (+) | 213 | WP_421078565.1 | 50S ribosomal protein L29 | - |
| Mjas_RS03730 (Mjas_03720) | yciH | 718942..719250 (+) | 309 | WP_421078425.1 | stress response translation initiation inhibitor YciH | - |
| Mjas_RS03735 (Mjas_03725) | rnp1 | 719436..719726 (+) | 291 | WP_421078426.1 | ribonuclease P protein component 1 | - |
| Mjas_RS03740 (Mjas_03730) | - | 719905..720234 (+) | 330 | WP_421078427.1 | 30S ribosomal protein S17 | - |
Sequence
Protein
Download Length: 75 a.a. Molecular weight: 7785.14 Da Isoelectric Point: 10.3805
>NTDB_id=1007376 Mjas_RS03685 WP_421078418.1 715215..715442(-) (MMJJ_RS05685) [Methanothermococcus sp. Ax23]
MKLLKKLTSKKGQVSMEIGILVAAAVAVAAIAAYYYVKNVKSSAKGAEVAASDATSKLGNKTVQASELINNTKLD
MKLLKKLTSKKGQVSMEIGILVAAAVAVAAIAAYYYVKNVKSSAKGAEVAASDATSKLGNKTVQASELINNTKLD
Nucleotide
Download Length: 228 bp
>NTDB_id=1007376 Mjas_RS03685 WP_421078418.1 715215..715442(-) (MMJJ_RS05685) [Methanothermococcus sp. Ax23]
ATGAAATTGTTAAAAAAATTAACCTCTAAAAAAGGGCAGGTGTCAATGGAAATTGGTATTTTAGTTGCTGCTGCTGTTGC
CGTTGCTGCTATTGCGGCATACTACTATGTAAAGAATGTTAAATCTAGTGCAAAAGGTGCTGAAGTTGCTGCTAGCGATG
CAACAAGCAAATTAGGTAATAAAACGGTTCAGGCAAGTGAATTAATTAATAATACCAAATTAGATTAA
ATGAAATTGTTAAAAAAATTAACCTCTAAAAAAGGGCAGGTGTCAATGGAAATTGGTATTTTAGTTGCTGCTGCTGTTGC
CGTTGCTGCTATTGCGGCATACTACTATGTAAAGAATGTTAAATCTAGTGCAAAAGGTGCTGAAGTTGCTGCTAGCGATG
CAACAAGCAAATTAGGTAATAAAACGGTTCAGGCAAGTGAATTAATTAATAATACCAAATTAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| MMJJ_RS05685 | Methanococcus maripaludis strain DSM 2067 |
66.667 |
80 |
0.533 |
| epdE | Methanococcus maripaludis strain DSM 2067 |
55.072 |
92 |
0.507 |