Detailed information NTG1007375

Bioinformatically predicted

Overview

• Name: epdJ
• Type: Machinery gene
• Locus tag: Mjas_RS03440
• Genome accession: NZ_CP157522
• Coordinates: 659833..660717 (-)
• Length: 294 a.a.
• NCBI ID: WP_421078375.1
• Uniprot ID: -
• Organism: Methanothermococcus sp. Ax23
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 654833..665717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Mjas_RS03415 (Mjas_03410)	-	654978..656207 (+)	1230	WP_421078370.1	AAA family ATPase	-
Mjas_RS03420 (Mjas_03415)	mptA	656297..657238 (+)	942	WP_421078371.1	GTP cyclohydrolase MptA	-
Mjas_RS03425 (Mjas_03420)	-	657398..658543 (+)	1146	WP_421078372.1	ATP-grasp domain-containing protein	-
Mjas_RS03430 (Mjas_03425)	tfe	658515..659114 (+)	600	WP_421078373.1	transcription factor E	-
Mjas_RS03435 (Mjas_03430)	-	659210..659836 (+)	627	WP_421078374.1	TIGR00295 family protein	-
Mjas_RS03440 (Mjas_03435)	epdJ	659833..660717 (-)	885	WP_421078375.1	type II secretion system F family protein	Machinery gene
Mjas_RS03445 (Mjas_03440)	-	660722..661873 (-)	1152	WP_421078376.1	type II secretion system F family protein	-
Mjas_RS03450 (Mjas_03445)	-	661888..664605 (-)	2718	WP_421078377.1	ATPase, T2SS/T4P/T4SS family	-
Mjas_RS03455 (Mjas_03450)	-	664878..665597 (-)	720	Protein_663	transcription initiation factor IIB	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 32720.37 Da
• Isoelectric Point: 9.2024

>NTDB_id=1007375 Mjas_RS03440 WP_421078375.1 659833..660717(-) (epdJ) [Methanothermococcus sp. Ax23]
MVNIYDIYNYIIRRNTLILKHAGININEKSYFMMLLLSPIIPIVLKYIMNLNSKSTIILIALYVLSVLSIPSMLYESKIE
KFERNLPKALYVMILSLESGRSVMDAINEVINSGIKEVDTVFLKIVALMTEKKLSFEDSIILVSNSIDSKIFRQIGRLII
ENRKYGGELAEVLRTLAKTLEDLQNLKAQLLSVTANGLAVGLIIICGVIPATAGIIGGYINAIAQMTPNIVAVTPEQLAK
CMENIQIGTGIFGILFAVPLFGLKINRMIITCTFCMTFGLVSFYGVLFMTKMLF

Nucleotide

• Length: 885 bp

>NTDB_id=1007375 Mjas_RS03440 WP_421078375.1 659833..660717(-) (epdJ) [Methanothermococcus sp. Ax23]
ATGGTGAATATTTATGACATATATAATTATATTATAAGACGTAATACCTTAATATTAAAACATGCAGGCATTAACATAAA
TGAAAAATCCTATTTTATGATGCTATTGCTTTCACCCATAATACCAATTGTGTTAAAATATATTATGAATCTTAATTCAA
AAAGCACAATTATATTAATAGCATTATATGTCCTTTCTGTATTATCAATTCCATCTATGTTATATGAGTCTAAAATAGAA
AAATTCGAACGTAATTTACCAAAAGCTCTTTATGTAATGATACTGTCATTAGAATCAGGTCGTTCAGTAATGGATGCCAT
TAACGAAGTTATAAATAGCGGCATTAAAGAAGTAGATACTGTTTTTTTAAAAATTGTTGCATTAATGACTGAAAAAAAAT
TAAGTTTTGAGGATTCCATTATATTAGTTTCAAATAGTATCGATTCAAAAATATTTAGACAGATTGGAAGACTAATTATA
GAAAATAGAAAATATGGTGGGGAATTGGCAGAGGTTCTTAGAACGCTTGCAAAAACACTTGAAGATTTGCAAAATCTAAA
AGCCCAATTACTCAGTGTTACAGCAAATGGTCTCGCAGTTGGATTAATAATAATATGTGGAGTTATCCCCGCAACTGCGG
GCATTATTGGAGGTTATATAAATGCAATAGCTCAAATGACCCCAAATATCGTTGCTGTCACTCCAGAACAACTTGCAAAA
TGTATGGAAAACATTCAAATTGGAACTGGAATTTTTGGTATTTTGTTTGCTGTGCCATTATTTGGTTTAAAAATAAATAG
AATGATAATTACCTGCACATTCTGCATGACCTTTGGTTTAGTGTCATTTTATGGAGTATTATTTATGACAAAAATGTTAT
TTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (91-213)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
epdJ	Methanococcus maripaludis strain DSM 2067	63.889	97.959	0.626