Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABLU29_RS04005 Genome accession   NZ_CP157498
Coordinates   701207..702493 (+) Length   428 a.a.
NCBI ID   WP_010906325.1    Uniprot ID   A0A2A9HU85
Organism   Lactococcus lactis strain 2B-5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 696207..707493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLU29_RS03980 (ABLU29_03970) rlmH 697656..698135 (+) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABLU29_RS03985 (ABLU29_03975) - 698154..698852 (+) 699 WP_058218386.1 DNA alkylation repair protein -
  ABLU29_RS03990 (ABLU29_03980) yajC 698947..699279 (+) 333 WP_003130588.1 preprotein translocase subunit YajC -
  ABLU29_RS03995 (ABLU29_03985) - 699651..700385 (+) 735 WP_003130589.1 isoprenyl transferase -
  ABLU29_RS04000 (ABLU29_03990) - 700385..701188 (+) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  ABLU29_RS04005 (ABLU29_03995) eeP 701207..702493 (+) 1287 WP_010906325.1 RIP metalloprotease RseP Regulator
  ABLU29_RS04010 (ABLU29_04000) - 702563..704413 (+) 1851 WP_010906324.1 proline--tRNA ligase -
  ABLU29_RS04015 (ABLU29_04005) - 704429..705760 (+) 1332 WP_058204417.1 FAD/NAD(P)-binding oxidoreductase -
  ABLU29_RS04020 (ABLU29_04010) - 705766..706302 (+) 537 WP_058212860.1 hypothetical protein -
  ABLU29_RS04025 (ABLU29_04015) - 706473..706712 (+) 240 WP_406840955.1 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46422.95 Da        Isoelectric Point: 6.5146

>NTDB_id=1007225 ABLU29_RS04005 WP_010906325.1 701207..702493(+) (eeP) [Lactococcus lactis strain 2B-5]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1007225 ABLU29_RS04005 WP_010906325.1 701207..702493(+) (eeP) [Lactococcus lactis strain 2B-5]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A9HU85

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.613

100

0.57

  eeP Streptococcus thermophilus LMD-9

56.381

100

0.568


Multiple sequence alignment