Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GPW69_RS05175 Genome accession   NZ_LR738724
Coordinates   1039238..1039903 (+) Length   221 a.a.
NCBI ID   WP_074391126.1    Uniprot ID   -
Organism   Streptococcus suis isolate 9401240     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1034238..1044903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW69_RS05145 - 1035336..1035476 (+) 141 WP_044683303.1 hypothetical protein -
  GPW69_RS05150 - 1035489..1035884 (+) 396 WP_074391123.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  GPW69_RS05155 - 1035887..1036639 (+) 753 WP_024407069.1 ABC transporter ATP-binding protein -
  GPW69_RS05160 - 1036640..1038610 (+) 1971 WP_074391124.1 FtsX-like permease family protein -
  GPW69_RS05165 relB 1038701..1038940 (+) 240 WP_015646833.1 type II toxin-antitoxin system RelB family antitoxin -
  GPW69_RS05170 - 1038930..1039196 (+) 267 WP_074391125.1 type II toxin-antitoxin system RelE family toxin -
  GPW69_RS05175 braR 1039238..1039903 (+) 666 WP_074391126.1 DNA-binding response regulator Regulator
  GPW69_RS05180 - 1039900..1040841 (+) 942 WP_074391127.1 sensor histidine kinase -
  GPW69_RS05185 - 1040916..1042424 (+) 1509 WP_074391128.1 phosphomannomutase/phosphoglucomutase -
  GPW69_RS05190 xerS 1042488..1043558 (-) 1071 WP_074391129.1 tyrosine recombinase XerS Machinery gene
  GPW69_RS05195 - 1044244..1044675 (-) 432 WP_141668691.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25431.22 Da        Isoelectric Point: 4.7677

>NTDB_id=1007153 GPW69_RS05175 WP_074391126.1 1039238..1039903(+) (braR) [Streptococcus suis isolate 9401240]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSNELEQVQLSPTETKILS
ALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFDRIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1007153 GPW69_RS05175 WP_074391126.1 1039238..1039903(+) (braR) [Streptococcus suis isolate 9401240]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAACACTTGGGAAAATCTTA
TCAAGTGGAAAGTGTGCAGAATTTCAGGGCTGTCAGTCAGGAAGTTGCTGAAATCAAACCAGACTTGGTGCTGATGGACA
TTAGCCTGCCTTATTACAACGGCTTTTATTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCT
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGTGATGATTTTGTTTCCAAGCCTTTTTCACTGGG
AATTTTGGATGCCAAAATCGGAGCCTTCCTGCGTCGGGTTAATCAATTCAGCAAATCAACTGATTTGTCAATTGACCAGT
TCCAACTTAGTTTAGACGGGCGATTTTCAAACGAATTGGAACAGGTTCAATTGTCTCCTACGGAAACCAAGATTTTGTCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGATGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAATACCCTCAATGTCAACATGACTAGATTGCGTAAGAAGGTGAGCGAAGTGGGATTTGACCGTATCCATACTGTTC
GTGGCGTGGGGTACCTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.727

99.548

0.475

Multiple sequence alignment