Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QUD95_RS00665 Genome accession   NZ_AP027299
Coordinates   107973..109241 (+) Length   422 a.a.
NCBI ID   WP_010737779.1    Uniprot ID   -
Organism   Enterococcus hirae strain L6E     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 102973..114241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUD95_RS00640 (L6E_01280) tsf 103367..104248 (+) 882 WP_010718871.1 translation elongation factor Ts -
  QUD95_RS00645 (L6E_01290) pyrH 104470..105192 (+) 723 WP_010718872.1 UMP kinase -
  QUD95_RS00650 (L6E_01300) frr 105196..105753 (+) 558 WP_010737781.1 ribosome recycling factor -
  QUD95_RS00655 (L6E_01310) - 105983..106792 (+) 810 WP_010718874.1 isoprenyl transferase -
  QUD95_RS00660 (L6E_01320) - 106789..107589 (+) 801 WP_034866992.1 phosphatidate cytidylyltransferase -
  QUD95_RS00665 (L6E_01330) eeP 107973..109241 (+) 1269 WP_010737779.1 RIP metalloprotease RseP Regulator
  QUD95_RS00670 (L6E_01340) - 109311..111014 (+) 1704 WP_010718877.1 proline--tRNA ligase -
  QUD95_RS00675 (L6E_01350) - 111212..112006 (-) 795 WP_010737778.1 SDR family oxidoreductase -
  QUD95_RS00680 (L6E_01360) - 112023..112865 (-) 843 WP_010737777.1 aldo/keto reductase -
  QUD95_RS00685 (L6E_01370) - 112997..113362 (+) 366 WP_010737776.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46003.56 Da        Isoelectric Point: 5.4616

>NTDB_id=100709 QUD95_RS00665 WP_010737779.1 107973..109241(+) (eeP) [Enterococcus hirae strain L6E]
MKTIITFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKVQLTNSIPMELIRYDLEEELTITGYVNGEEEQEVTYSVAHDASIIEADGTELRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFLLAILLFILLAFMHGGVQVTNTNQIGEVLPNGAAQTAGLKENDKILEINGNAIHSWG
DLTATITENPGKKLSVEVERNGQKQTLSVTPGVVESNGKKYGQLGIKAPMKTGFFDKIIGGTQQAFSSSLEIFKALGSLF
TNFSLNKLGGPVMMFQLSSEAADQGILTVISLMAILSMNLGIVNLLPIPALDGGKLVLNVVEGIRGKPISQEKEGFITLA
GFGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=100709 QUD95_RS00665 WP_010737779.1 107973..109241(+) (eeP) [Enterococcus hirae strain L6E]
ATGAAAACAATTATTACATTTATTATTGTTTTTGGCATTTTGGTCATTGTTCATGAATTTGGACACTTCTTCTTTGCGAA
ACGATCAGGAATTCTCGTTCGAGAGTTTGCAATTGGTATGGGACCCAAAATCTATGGGCATCAAGCTAAGGACGGAACTA
CCTATACACTACGTTTATTGCCAATCGGAGGTTATGTGAGGATGGCAGGAAACGGGGACGATGAAACAGAGATGGCTCCG
GGAATGCCGTTATCTCTTTTATTAAATTCTGATGGTATCGTAGAGAAAATCAATTTAAGTAAAAAAGTACAGCTTACAAA
TAGTATCCCGATGGAATTGATTCGTTATGATCTTGAAGAAGAATTAACGATTACTGGCTATGTCAATGGCGAGGAAGAAC
AAGAAGTGACTTATTCTGTCGCGCATGATGCTTCGATCATTGAAGCCGATGGCACAGAACTTCGAATCGCTCCAAAAGAC
GTGCAGTTCCAATCAGCCAAATTATGGCAACGGATGTTGACGAATTTCGCAGGACCAATGAATAATTTCTTGTTAGCTAT
TTTGTTATTTATTCTGCTTGCTTTTATGCATGGCGGAGTTCAAGTCACTAACACGAACCAAATTGGCGAAGTCTTACCTA
ATGGTGCAGCACAAACTGCTGGTTTAAAAGAAAATGATAAAATCTTGGAGATCAATGGTAATGCCATTCATTCTTGGGGA
GATCTAACGGCTACGATCACCGAGAATCCTGGGAAAAAACTCAGTGTTGAAGTCGAGCGCAATGGACAGAAACAAACCCT
TTCAGTAACACCAGGCGTGGTAGAATCGAATGGAAAAAAATATGGGCAATTAGGAATCAAAGCACCAATGAAAACGGGAT
TTTTTGACAAAATCATTGGAGGAACACAACAAGCTTTCAGTAGTTCATTAGAAATTTTTAAAGCACTAGGCTCATTATTT
ACAAACTTTAGTTTAAATAAATTGGGCGGTCCTGTAATGATGTTCCAATTATCTTCAGAAGCTGCAGATCAAGGAATATT
AACGGTCATTAGCTTGATGGCCATTCTTTCGATGAATTTGGGAATCGTTAACTTATTACCAATTCCAGCGCTTGACGGAG
GAAAGCTTGTCTTGAACGTCGTGGAAGGGATTCGTGGAAAACCAATCAGCCAAGAAAAAGAAGGCTTTATCACATTAGCA
GGCTTCGGTTTATTGATGCTTTTAATGGTATTAGTCACATGGAATGATATCCAACGATTCTTTTTCTAG

Domains


Predicted by InterproScan.

(199-270)

(6-408)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

56.776

100

0.576

  eeP Streptococcus thermophilus LMG 18311

56.542

100

0.573


Multiple sequence alignment