Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABK819_RS26130 | Genome accession | NZ_CP157460 |
| Coordinates | 5566653..5567210 (+) | Length | 185 a.a. |
| NCBI ID | WP_019486632.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5561653..5572210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABK819_RS26110 (ABK819_26090) | pilR | 5562929..5564266 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| ABK819_RS26115 (ABK819_26095) | thiO | 5564312..5565406 (-) | 1095 | WP_023094393.1 | glycine oxidase ThiO | - |
| ABK819_RS26120 (ABK819_26100) | - | 5565541..5566050 (+) | 510 | WP_019486634.1 | Tfp pilus assembly protein FimT/FimU | - |
| ABK819_RS26125 (ABK819_26105) | - | 5566156..5566662 (+) | 507 | WP_019486633.1 | Tfp pilus assembly protein FimT/FimU | - |
| ABK819_RS26130 (ABK819_26110) | pilV | 5566653..5567210 (+) | 558 | WP_019486632.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ABK819_RS26135 (ABK819_26115) | pilW | 5567207..5568031 (+) | 825 | WP_023094394.1 | type 4a pilus minor pilin PilW | - |
| ABK819_RS26140 (ABK819_26120) | pilX | 5568028..5568615 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ABK819_RS26145 (ABK819_26125) | pilY1 | 5568627..5572112 (+) | 3486 | WP_019486630.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20086.26 Da Isoelectric Point: 7.9204
>NTDB_id=1007065 ABK819_RS26130 WP_019486632.1 5566653..5567210(+) (pilV) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1007065 ABK819_RS26130 WP_019486632.1 5566653..5567210(+) (pilV) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |