Detailed information NTG1007064

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABK819_RS26110
• Genome accession: NZ_CP157460
• Coordinates: 5562929..5564266 (+)
• Length: 445 a.a.
• NCBI ID: WP_003110427.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5557929..5569266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABK819_RS26085 (ABK819_26065)	pgeF	5558072..5558800 (-)	729	WP_019486636.1	peptidoglycan editing factor PgeF	-
ABK819_RS26090 (ABK819_26070)	rluD	5558797..5559759 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ABK819_RS26095 (ABK819_26075)	-	5559905..5560930 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ABK819_RS26100 (ABK819_26080)	-	5561087..5561332 (+)	246	WP_003102591.1	PP0621 family protein	-
ABK819_RS26105 (ABK819_26085)	pilS	5561322..5562914 (+)	1593	WP_003094692.1	two-component system sensor histidine kinase PilS	Regulator
ABK819_RS26110 (ABK819_26090)	pilR	5562929..5564266 (+)	1338	WP_003110427.1	two-component system response regulator PilR	Regulator
ABK819_RS26115 (ABK819_26095)	thiO	5564312..5565406 (-)	1095	WP_023094393.1	glycine oxidase ThiO	-
ABK819_RS26120 (ABK819_26100)	-	5565541..5566050 (+)	510	WP_019486634.1	Tfp pilus assembly protein FimT/FimU	-
ABK819_RS26125 (ABK819_26105)	-	5566156..5566662 (+)	507	WP_019486633.1	Tfp pilus assembly protein FimT/FimU	-
ABK819_RS26130 (ABK819_26110)	pilV	5566653..5567210 (+)	558	WP_019486632.1	type 4a pilus minor pilin PilV	Machinery gene
ABK819_RS26135 (ABK819_26115)	pilW	5567207..5568031 (+)	825	WP_023094394.1	type 4a pilus minor pilin PilW	-
ABK819_RS26140 (ABK819_26120)	pilX	5568028..5568615 (+)	588	WP_003094700.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49723.03 Da
• Isoelectric Point: 5.8638

>NTDB_id=1007064 ABK819_RS26110 WP_003110427.1 5562929..5564266(+) (pilR) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLADRI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1007064 ABK819_RS26110 WP_003110427.1 5562929..5564266(+) (pilR) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGTGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGATCGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCAGGCAACGTCCGCGAGCTGGAGAATATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCGGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTATCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.775	100	0.998
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384