Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GPW68_RS05760 Genome accession   NZ_LR738723
Coordinates   1137508..1138173 (+) Length   221 a.a.
NCBI ID   WP_024405695.1    Uniprot ID   -
Organism   Streptococcus suis isolate GD-0088     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1132508..1143173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW68_RS05730 - 1133599..1133739 (+) 141 WP_012775106.1 hypothetical protein -
  GPW68_RS05735 - 1133752..1134129 (+) 378 WP_011922413.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  GPW68_RS05740 - 1134150..1134902 (+) 753 WP_011922409.1 ABC transporter ATP-binding protein -
  GPW68_RS05745 - 1134903..1136873 (+) 1971 WP_024405693.1 ABC transporter permease -
  GPW68_RS05750 relB 1136965..1137216 (+) 252 WP_012775104.1 type II toxin-antitoxin system RelB family antitoxin -
  GPW68_RS05755 - 1137200..1137466 (+) 267 WP_024405694.1 type II toxin-antitoxin system RelE family toxin -
  GPW68_RS05760 braR 1137508..1138173 (+) 666 WP_024405695.1 DNA-binding response regulator Regulator
  GPW68_RS05765 - 1138170..1139111 (+) 942 WP_024405696.1 sensor histidine kinase -
  GPW68_RS05770 - 1139186..1140694 (+) 1509 WP_024405697.1 phosphoglucomutase -
  GPW68_RS05775 xerS 1140764..1141834 (-) 1071 WP_024405698.1 tyrosine recombinase XerS Machinery gene
  GPW68_RS11640 - 1142001..1142237 (-) 237 WP_226319150.1 hypothetical protein -
  GPW68_RS11645 - 1142234..1142527 (-) 294 WP_226319149.1 adenylyl-sulfate kinase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25433.19 Da        Isoelectric Point: 4.7792

>NTDB_id=1007064 GPW68_RS05760 WP_024405695.1 1137508..1138173(+) (braR) [Streptococcus suis isolate GD-0088]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDINLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSSESEQVQLSPTETKILS
ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1007064 GPW68_RS05760 WP_024405695.1 1137508..1138173(+) (braR) [Streptococcus suis isolate GD-0088]
ATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCATTTGGGAAAATCTTA
TCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCGGAAATCAAACCAGACTTAGTGCTGATGGACA
TTAACTTGCCCTATTACAACGGTTTTTATTGGACAACGGAAATCCGTAAAACCATGACCATGCCAATTATCTTTATCTCC
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTTTCTAAGCCATTTTCTCTAGG
AATTTTGGATGCCAAAATCGGTGCCTTCCTGCGTAGGGTTAATCAATTCAGCAAATCAACCGATTTGTCTATCGACCAAT
TCCAGCTTAGTTTGGACGGACGATTTTCAAGCGAATCGGAACAGGTTCAGCTTTCACCTACTGAAACCAAGATTTTGTCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGAAGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTATTGA
CCAGAACACGCTCAATGTCAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACGGTTC
GTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)

Response regulator receiver domain (Response_reg)

(6-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.727

99.548

0.475

Multiple sequence alignment