Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABLB95_RS11650 Genome accession   NZ_CP157451
Coordinates   2486787..2491157 (-) Length   1456 a.a.
NCBI ID   WP_348908738.1    Uniprot ID   -
Organism   Acinetobacter radioresistens strain XH1688     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2481787..2496157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB95_RS11620 (ABLB95_11610) elsL 2482795..2483304 (-) 510 WP_248132411.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ABLB95_RS11625 (ABLB95_11615) - 2483308..2483715 (-) 408 WP_284909020.1 YbaN family protein -
  ABLB95_RS11630 (ABLB95_11620) - 2483821..2484690 (+) 870 WP_346816201.1 DUF1853 family protein -
  ABLB95_RS11635 (ABLB95_11625) - 2484828..2484968 (+) 141 WP_005018775.1 entericidin A/B family lipoprotein -
  ABLB95_RS11640 (ABLB95_11630) dapE 2485113..2486249 (+) 1137 WP_348908739.1 succinyl-diaminopimelate desuccinylase -
  ABLB95_RS11645 (ABLB95_11635) - 2486308..2486772 (-) 465 WP_346816203.1 hypothetical protein -
  ABLB95_RS11650 (ABLB95_11640) chpA 2486787..2491157 (-) 4371 WP_348908738.1 Hpt domain-containing protein Regulator
  ABLB95_RS11655 (ABLB95_11645) - 2491323..2493404 (-) 2082 WP_005018770.1 methyl-accepting chemotaxis protein -
  ABLB95_RS11660 (ABLB95_11650) - 2493450..2493986 (-) 537 WP_005018769.1 chemotaxis protein CheW -
  ABLB95_RS11665 (ABLB95_11655) - 2493991..2494359 (-) 369 WP_005018768.1 response regulator -
  ABLB95_RS11670 (ABLB95_11660) pilG 2494381..2494764 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  ABLB95_RS11675 (ABLB95_11665) - 2495102..2495683 (+) 582 WP_005406853.1 hypothetical protein -

Sequence


Protein


Download         Length: 1456 a.a.        Molecular weight: 164290.07 Da        Isoelectric Point: 4.4445

>NTDB_id=1006984 ABLB95_RS11650 WP_348908738.1 2486787..2491157(-) (chpA) [Acinetobacter radioresistens strain XH1688]
MKQILKDLIGTTTLPEDSYLDQDAEILEIFVEELEEIFTDLDILIQQPEQQDKLTSIRRYFHTLKGSGRMVGAKSSGELA
WTVEDLLNRIIAKTQAFTLAISRYVELVFKIYKYKLFYNFKNSQPHAIDLRPLVLIGQQLQQHGSLEPALEELLELSWTL
CSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSLTAETLAIFLEESEEHLATIDEFLNNNEQGSNYNALIRALHTLRG
SSAMAQVEHIFEASSKIENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLERVYQTFNHAWENYGFHQ
EPVDDLVNPQGLVSRLLELEINQLLDAEFEFDQRTRTEYPEYLQLLVQQAQELVEHTRNRASQGVYDFTLELLQSYQQLL
AKPQLLNLDYAYELYTQAHQQLIYLFDTLAAGQRVSLSPAHQSLLEELSAFVQQEIQQVDELSTVTEPFEAPVDVAVLQH
TFNLGALSARIAADKALMHSEHSNQVADADLRDIFLEEAEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGGANMV
QATHMGLIAHELESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESISTGVLVTTAE
PKVAEEKLSESSQNIESNIADCTLADAEIAEHSEELQTDEQVRSIVEEVFLEEAEELLQTAHKLLDQWVEERSNRSLLLQ
LQRNAHSLKGGARMAELEPVAVIAYALENTFEQFGLHNLTTSVYDPLLHTALRWLENAIFKEQYENFDSLKHSLDSIQFT
EIPAQLINQIPADNIVADGSLFEFVHGDGTEPPSMMGEWDNTERTENNEMIRISADLVEKMIDLAGENSINRSRIEMDVG
QVGSILSDMELAIQRLADQLRRMEGELESQIIAKHGTENSRYSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTTLSEK
IRDTEGLLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGELDRNILERLVTPLEHMLR
NAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDGQGINLEKLKNKALERGLIGAEQKLEAEELAQLIFHPG
LSTAVEITQISGRGVGLDVVQSSIKAMGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERIVRIS
PSMLEDYFAGKEDTFRIDNMHYKLRYLSEFVANQSLPRLTGIAHSLPVLLIKGSSGQTVALLVDQLVGSRAQIVVKPVGQ
QLASVGAVAGATILGDGQVCLILDGQYIARQVQSSLRVKEVKESRELHRFNDERRLIMIVDDSVTVRKVTSRLLERQGYD
VVTAKDGVEAIEQLESIKPDLMLLDIEMPRMDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFTLGATQYMGKPFQ
EADLLANIEALLEVMV

Nucleotide


Download         Length: 4371 bp        

>NTDB_id=1006984 ABLB95_RS11650 WP_348908738.1 2486787..2491157(-) (chpA) [Acinetobacter radioresistens strain XH1688]
ATGAAACAAATACTAAAAGACCTGATTGGAACAACGACTCTTCCTGAAGATAGCTATCTTGACCAAGATGCAGAGATTCT
TGAAATTTTTGTTGAAGAACTAGAAGAAATCTTTACTGATTTGGATATTTTGATACAGCAGCCTGAGCAGCAGGACAAGC
TGACCAGTATTCGCCGTTATTTTCATACCTTAAAAGGCTCCGGCCGGATGGTAGGAGCTAAAAGTTCCGGCGAGTTGGCT
TGGACGGTTGAAGATCTCTTGAATCGAATAATTGCTAAAACACAGGCTTTTACCCTGGCGATCAGTCGTTATGTAGAATT
AGTCTTTAAGATTTACAAATACAAGTTATTTTATAACTTTAAAAATAGTCAGCCTCATGCGATTGATTTGCGTCCCCTCG
TATTGATCGGGCAACAACTGCAACAGCATGGCAGTCTTGAACCGGCACTTGAGGAATTGCTGGAGCTTAGCTGGACCTTA
TGTTCGCCTGAGACAGTCACCGGGCTTGAGCTGGTGGAACATACAGCAGAGACTCTACCACCACTAGGTGTAGAGAAGCT
TGAAATTCACGAGGAATTTGATTCACTAACTGCCGAGACACTGGCGATCTTTCTTGAAGAGTCGGAAGAACATCTGGCAA
CTATTGATGAGTTCTTGAATAATAATGAACAGGGCAGTAATTATAATGCTCTAATCCGCGCTTTACATACTTTGCGTGGC
AGCTCGGCCATGGCTCAGGTAGAACACATATTTGAAGCAAGTAGTAAAATTGAAAATCTGTTTAAAACCATGCTGCAAGA
TGAGCTGGTATCTACTTCAAATGAAACCGCTTTACTTACTCATTATGCTGAATTTGTAAGGGATTATCTCTACATTCTAA
AACAGGAATGTAATATAGAACAGTTGGAACGGGTTTATCAGACCTTTAATCATGCTTGGGAAAACTACGGATTTCATCAA
GAACCTGTGGATGATCTCGTGAACCCTCAAGGTCTGGTTTCAAGGCTCCTCGAGCTTGAGATCAACCAGTTACTAGATGC
CGAGTTCGAGTTTGATCAGCGTACCCGTACCGAATATCCAGAATATTTACAGCTTTTGGTACAGCAGGCACAGGAACTGG
TTGAACATACACGAAACCGTGCCTCCCAAGGTGTATATGATTTTACGTTAGAACTACTTCAGAGCTATCAGCAGCTCTTG
GCAAAGCCACAGCTATTAAATCTTGATTATGCATATGAACTTTATACTCAAGCTCATCAGCAGCTGATTTATCTGTTTGA
TACGCTTGCAGCGGGACAGCGTGTCAGCCTGAGCCCGGCTCATCAAAGTCTGCTTGAAGAATTATCTGCATTTGTACAGC
AAGAAATACAACAGGTAGATGAGTTGTCCACTGTTACTGAGCCTTTTGAGGCTCCGGTTGACGTAGCAGTTTTGCAACAT
ACTTTCAACCTGGGAGCGCTTTCAGCACGTATAGCGGCTGATAAAGCGCTGATGCATTCTGAACATAGTAATCAGGTTGC
TGATGCTGATCTGCGCGATATCTTCTTGGAAGAGGCCGAAGAATTACTGGCTGGTATGGATAGTGACCTGAACAGTTGGA
CAAAAGAATCAGGCCAAGTTACTGCTCTGAACAATCTAATGCGTTATTTGCATACCTTAAAAGGTGGTGCAAACATGGTG
CAGGCCACCCATATGGGATTAATTGCACATGAGCTGGAAAGCATTTATCAGAGAATTATTAACGGGCAGGTTCAGGTCTC
TACTGTACTGATGAGTATTATCCGGCTGGTACAGGATGAGCTTGCAGAACGCATCCAGATACTACGTGAACAGCAGATTG
ACTACCCGGCGCCAGCAACTATTGAAATCCTCAAAAATATTGAGTCGATTAGCACTGGTGTATTAGTGACTACGGCTGAG
CCAAAAGTAGCAGAAGAGAAGCTGTCCGAGTCGAGCCAAAATATTGAATCAAATATAGCTGATTGTACACTTGCGGATGC
GGAAATCGCTGAGCATTCCGAAGAGTTACAAACAGATGAACAGGTAAGGTCAATTGTTGAAGAGGTTTTTCTCGAGGAAG
CCGAAGAGCTGTTACAGACCGCTCATAAATTACTAGATCAATGGGTAGAAGAGCGCAGTAACCGGAGTCTGTTACTACAG
CTGCAACGGAATGCTCATAGTCTTAAGGGCGGCGCACGGATGGCCGAGCTTGAGCCGGTAGCCGTGATTGCTTATGCGCT
GGAAAATACTTTTGAACAATTTGGTCTGCACAATCTTACCACTAGTGTTTATGACCCGCTTTTACATACTGCTTTACGCT
GGTTGGAAAATGCTATCTTCAAAGAGCAGTATGAAAACTTTGACAGTTTGAAGCACAGCTTGGACTCGATCCAGTTTACT
GAAATTCCTGCTCAGCTCATCAATCAGATTCCTGCAGATAATATCGTAGCTGATGGCAGTCTGTTTGAATTCGTGCATGG
TGATGGTACTGAACCGCCTTCCATGATGGGTGAATGGGACAATACAGAGCGGACTGAAAATAATGAAATGATCCGGATTT
CAGCCGATCTGGTTGAGAAAATGATTGATCTTGCAGGTGAAAACTCCATCAACCGTTCCCGTATTGAAATGGATGTGGGA
CAGGTCGGTTCTATTCTTTCCGACATGGAACTGGCTATTCAACGACTGGCTGACCAGTTACGCCGTATGGAGGGTGAGCT
TGAGAGTCAGATTATTGCTAAGCATGGTACAGAGAATTCACGTTATAGTGATTTTGATCCTTTAGAAATGGATCAGTATT
CTTCGCTAAATCAGTTATCCAAATCACTGGCTGAGTCAGCATCTGACTTACTTGACTTTAAAACCACATTATCTGAAAAA
ATACGTGATACTGAAGGTCTGCTATTACAGCAGTCAAGGATTCAGGCAGAGATTCAGGAAAACCTGATGCGGACCCGTCT
GGTACCCTTTTCTCGATTATTACCGCGTTTACAGCGCATAGCACGGCAGACCTCTTCAGCACTAAACCGTCCTGCAGAAC
TCGTTGTTCAAAACACTGAAGGAGAGCTGGACCGCAATATTTTAGAGCGACTGGTCACCCCGCTTGAACATATGCTGCGA
AATGCAATTGATCATGGTATTGAAACCATTGAGCAGCGTCTCAAGCAAGGGAAACCTGAAAGTGGCCGTATTGAGCTGAA
TATTAATCGCCAAGGTACAGATGTCATCATTACTTTTACAGATGATGGCCAAGGTATTAATCTTGAAAAGCTGAAAAATA
AAGCACTAGAGCGAGGTCTGATTGGAGCGGAACAAAAACTGGAAGCTGAAGAGCTGGCCCAGTTGATCTTTCATCCAGGT
TTAAGCACTGCAGTAGAAATTACCCAGATTTCTGGTCGTGGTGTAGGGCTGGATGTGGTACAGAGCAGTATCAAGGCGAT
GGGTGGTCATGTGACGGTCGAGTCTGTACAGGGGCAGGGTACAACATTTACGATTCGTGTACCAACTACAGTAGCAATCA
GTGATGCCCTGATGGTTAAAGCAGGTGACCAGCAATACGCTGTACCATTGGCGCAGATTGAACGTATTGTGCGTATCTCT
CCTTCTATGCTGGAAGACTATTTTGCTGGCAAAGAAGATACTTTCCGTATCGACAATATGCATTATAAGCTACGTTATCT
TTCAGAGTTTGTAGCAAATCAGTCTCTGCCTCGTCTTACCGGTATAGCCCACTCTCTGCCGGTACTGCTGATTAAAGGGA
GTAGTGGCCAGACAGTAGCGTTACTGGTTGACCAGTTGGTCGGATCTCGTGCACAAATTGTGGTAAAACCAGTGGGTCAA
CAGCTGGCCAGCGTAGGTGCAGTAGCTGGTGCAACAATTTTAGGTGATGGACAGGTTTGTCTCATTCTGGATGGGCAGTA
TATTGCTCGTCAGGTTCAGTCTTCATTACGTGTCAAGGAAGTAAAAGAGTCTCGTGAGTTGCATCGCTTTAATGATGAAC
GACGTCTGATTATGATCGTTGATGACTCAGTCACTGTACGCAAAGTCACCAGCCGATTGCTTGAGCGTCAAGGTTATGAT
GTAGTGACCGCTAAAGATGGTGTTGAAGCGATTGAACAGCTGGAAAGTATTAAGCCTGATTTAATGCTGCTCGATATTGA
AATGCCGCGTATGGATGGTTTTGAAGTAACTAATCTGGTACGTCATCATGATGTACATCGTAATATGCCAATTATTATGA
TTACTTCACGTACAGGTGAAAAACATCGTGAGCGCGCTTTTACACTCGGAGCAACGCAATATATGGGCAAACCTTTCCAG
GAAGCAGACCTGTTGGCCAATATTGAAGCGTTACTTGAGGTTATGGTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.651

100

0.636


Multiple sequence alignment