Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABLB99_RS10130 | Genome accession | NZ_CP157447 |
| Coordinates | 2125026..2125406 (-) | Length | 126 a.a. |
| NCBI ID | WP_004709113.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain XH1727 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2120026..2130406
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLB99_RS10105 (ABLB99_10100) | - | 2120487..2121611 (-) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABLB99_RS10110 (ABLB99_10105) | ung | 2121608..2122321 (-) | 714 | WP_004709105.1 | uracil-DNA glycosylase | - |
| ABLB99_RS10115 (ABLB99_10110) | - | 2122372..2122968 (-) | 597 | WP_004709107.1 | 6-carboxytetrahydropterin synthase | - |
| ABLB99_RS10120 (ABLB99_10115) | gspK | 2123198..2124157 (-) | 960 | WP_004709110.1 | type II secretion system minor pseudopilin GspK | - |
| ABLB99_RS10125 (ABLB99_10120) | xcpW | 2124157..2125026 (-) | 870 | WP_139887437.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABLB99_RS10130 (ABLB99_10125) | xcpV | 2125026..2125406 (-) | 381 | WP_004709113.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABLB99_RS10135 (ABLB99_10130) | - | 2125396..2125947 (-) | 552 | WP_004709114.1 | type II secretion system protein | - |
| ABLB99_RS10140 (ABLB99_10135) | - | 2125957..2126565 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABLB99_RS10145 (ABLB99_10140) | - | 2126603..2127376 (-) | 774 | WP_004709116.1 | TatD family hydrolase | - |
| ABLB99_RS10150 (ABLB99_10145) | - | 2127394..2127735 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABLB99_RS10155 (ABLB99_10150) | - | 2127748..2128728 (-) | 981 | WP_032011231.1 | DNA polymerase III subunit delta' | - |
| ABLB99_RS10160 (ABLB99_10155) | kdsB | 2128740..2129501 (-) | 762 | WP_004709120.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13962.16 Da Isoelectric Point: 9.4463
>NTDB_id=1006931 ABLB99_RS10130 WP_004709113.1 2125026..2125406(-) (xcpV) [Acinetobacter nosocomialis strain XH1727]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1006931 ABLB99_RS10130 WP_004709113.1 2125026..2125406(-) (xcpV) [Acinetobacter nosocomialis strain XH1727]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAGCAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAGCAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
96.825 |
100 |
0.968 |