Detailed information NTG1006930

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABLB99_RS10125
• Genome accession: NZ_CP157447
• Coordinates: 2124157..2125026 (-)
• Length: 289 a.a.
• NCBI ID: WP_139887437.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain XH1727
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2119157..2130026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB99_RS10095 (ABLB99_10090)	-	2119467..2119907 (-)	441	WP_004709101.1	SRPBCC family protein	-
ABLB99_RS10100 (ABLB99_10095)	tadA	2119977..2120480 (-)	504	WP_031944625.1	tRNA adenosine(34) deaminase TadA	-
ABLB99_RS10105 (ABLB99_10100)	-	2120487..2121611 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
ABLB99_RS10110 (ABLB99_10105)	ung	2121608..2122321 (-)	714	WP_004709105.1	uracil-DNA glycosylase	-
ABLB99_RS10115 (ABLB99_10110)	-	2122372..2122968 (-)	597	WP_004709107.1	6-carboxytetrahydropterin synthase	-
ABLB99_RS10120 (ABLB99_10115)	gspK	2123198..2124157 (-)	960	WP_004709110.1	type II secretion system minor pseudopilin GspK	-
ABLB99_RS10125 (ABLB99_10120)	xcpW	2124157..2125026 (-)	870	WP_139887437.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABLB99_RS10130 (ABLB99_10125)	xcpV	2125026..2125406 (-)	381	WP_004709113.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABLB99_RS10135 (ABLB99_10130)	-	2125396..2125947 (-)	552	WP_004709114.1	type II secretion system protein	-
ABLB99_RS10140 (ABLB99_10135)	-	2125957..2126565 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABLB99_RS10145 (ABLB99_10140)	-	2126603..2127376 (-)	774	WP_004709116.1	TatD family hydrolase	-
ABLB99_RS10150 (ABLB99_10145)	-	2127394..2127735 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABLB99_RS10155 (ABLB99_10150)	-	2127748..2128728 (-)	981	WP_032011231.1	DNA polymerase III subunit delta'	-
ABLB99_RS10160 (ABLB99_10155)	kdsB	2128740..2129501 (-)	762	WP_004709120.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32704.26 Da
• Isoelectric Point: 9.7491

>NTDB_id=1006930 ABLB99_RS10125 WP_139887437.1 2124157..2125026(-) (xcpW) [Acinetobacter nosocomialis strain XH1727]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREHHTRNMVSRLAARSGGVSTGYSEHCSSSCAWTKLRF
VNPRSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALE
IDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIIVLTPQEVTKWP
EVNIDPTKPNELKKLPKGIKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 870 bp

>NTDB_id=1006930 ABLB99_RS10125 WP_139887437.1 2124157..2125026(-) (xcpW) [Acinetobacter nosocomialis strain XH1727]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCATCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCAGGTGGTGTGTCGACTGGCTATTCAGAGCATTGCTCTTCATCTTGCGCTTGGACAAAGCTTCGCTTT
GTTAATCCTCGCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATCTTTGCGGTCTTATCCTTATTGGGGTG
GAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGTGCATTTGTTTGAGTTACAAGATGCTT
ATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAGGTGGCCAACTTCATCCAGCTTTAGAA
ATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAACAAGGTTTATCACCGTTTGAACGAAT
TGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAATAATGAGCAAC
CTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATAGTTTTGACTCCGCAAGAGGTAACAAAGTGGCCT
GAGGTTAATATTGATCCAACAAAGCCTAACGAATTGAAAAAATTACCGAAAGGAATAAAAATTCAACTTACTGTAGCAGG
AGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCCACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (83-105)

• Type II secretion system (T2SS), protein J (T2SSJ) (139-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	85.246	84.429	0.72