Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABLC00_RS15300 Genome accession   NZ_CP157432
Coordinates   3289776..3294299 (-) Length   1507 a.a.
NCBI ID   WP_033846601.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain XH1679     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3284776..3299299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLC00_RS15270 (ABLC00_15270) elsL 3285528..3286031 (-) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ABLC00_RS15275 (ABLC00_15275) - 3286181..3286549 (-) 369 WP_004885387.1 YbaN family protein -
  ABLC00_RS15280 (ABLC00_15280) - 3286654..3287547 (+) 894 WP_004885386.1 DUF1853 family protein -
  ABLC00_RS15285 (ABLC00_15285) - 3287660..3287803 (+) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  ABLC00_RS15290 (ABLC00_15290) dapE 3287929..3289062 (+) 1134 WP_004885383.1 succinyl-diaminopimelate desuccinylase -
  ABLC00_RS15295 (ABLC00_15295) - 3289312..3289779 (-) 468 WP_004885382.1 hypothetical protein -
  ABLC00_RS15300 (ABLC00_15300) chpA 3289776..3294299 (-) 4524 WP_033846601.1 hybrid sensor histidine kinase/response regulator Regulator
  ABLC00_RS15305 (ABLC00_15305) - 3294447..3296528 (-) 2082 WP_004885376.1 methyl-accepting chemotaxis protein -
  ABLC00_RS15310 (ABLC00_15310) - 3296575..3297111 (-) 537 WP_004885375.1 chemotaxis protein CheW -
  ABLC00_RS15315 (ABLC00_15315) - 3297169..3297531 (-) 363 WP_002051151.1 PleD family two-component system response regulator -
  ABLC00_RS15320 (ABLC00_15320) pilG 3297558..3297941 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABLC00_RS15325 (ABLC00_15325) - 3298224..3298862 (+) 639 WP_004885373.1 hypothetical protein -

Sequence


Protein


Download         Length: 1507 a.a.        Molecular weight: 171474.94 Da        Isoelectric Point: 4.3392

>NTDB_id=1006810 ABLC00_RS15300 WP_033846601.1 3289776..3294299(-) (chpA) [Acinetobacter nosocomialis strain XH1679]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLFNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQTSNFQPVPVVEVFDSESEIFSEQELISEVLIDEVPAEIEPVLTELEVHNDQLVFDNVVTELATPVEAITSVTSEENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKANKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLSEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=1006810 ABLC00_RS15300 WP_033846601.1 3289776..3294299(-) (chpA) [Acinetobacter nosocomialis strain XH1679]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATCCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGATACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTGCAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAGCTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGACGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCGCAGGTCGAAACAATTTTTGAAGCAAGTACCAAAGTTGAGCACTTATTTAAAATACTATTGCA
AGAAGAACTCTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTGTTGTTGTTAGATGTTTCTGAATTATT
AGATGCAGAGTTAGATTTTGAGAAAGGCATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGATTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGCATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTTCACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTATTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCTTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAGGCTGATG
AACTACTGGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCTTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGTCTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAACGCGTTAAAACGAGCA
GGTCAAACCTCTAACTTCCAACCTGTACCAGTGGTTGAAGTATTTGATAGTGAAAGTGAGATTTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAGTACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATAATGATCAGC
TGGTATTTGATAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCTGTTACATCAGAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCTTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGTAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCA
CTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATCCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACCTTCATTCAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTAGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGTCAGTTCGGTCATACATTGGTTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTGC
TTTTACAACAGTCGCGTATTCAGGCAGAAATTCAAGAAGGCTTAATGCGAACACGTCTAGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGAATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCATATGCTCAGAAATGCAATCGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGCGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTAGAAAAAGTCCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATTGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGTCCTAAAGAACTATTTGAATATGAAAATAAGCGTTATCCATTACGTTATCTTTCAGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGCCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAA
TTGCAGGTGCCACGATTTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTTAGTGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGCCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCGGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAAGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCATTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.833

100

0.928


Multiple sequence alignment