Detailed information NTG1006776

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABLB96_RS12595
• Genome accession: NZ_CP157428
• Coordinates: 2649272..2650087 (-)
• Length: 271 a.a.
• NCBI ID: WP_348897165.1
• Uniprot ID: A0AB39K1Q1
• Organism: Acinetobacter sp. XH1741
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2644272..2655087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB96_RS12565 (ABLB96_12575)	-	2644579..2645019 (-)	441	WP_348897159.1	SRPBCC family protein	-
ABLB96_RS12570 (ABLB96_12580)	tadA	2645090..2645593 (-)	504	WP_348897160.1	tRNA adenosine(34) deaminase TadA	-
ABLB96_RS12575 (ABLB96_12585)	-	2645602..2646726 (-)	1125	WP_348897161.1	enoyl-CoA hydratase/isomerase family protein	-
ABLB96_RS12580 (ABLB96_12590)	ung	2646723..2647436 (-)	714	WP_348897162.1	uracil-DNA glycosylase	-
ABLB96_RS12585 (ABLB96_12595)	-	2647487..2648083 (-)	597	WP_348897163.1	6-carboxytetrahydropterin synthase	-
ABLB96_RS12590 (ABLB96_12600)	gspK	2648313..2649272 (-)	960	WP_348897164.1	type II secretion system minor pseudopilin GspK	-
ABLB96_RS12595 (ABLB96_12605)	xcpW	2649272..2650087 (-)	816	WP_348897165.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABLB96_RS12600 (ABLB96_12610)	xcpV	2650087..2650467 (-)	381	WP_348897166.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABLB96_RS12605 (ABLB96_12615)	-	2650457..2651011 (-)	555	WP_348897167.1	type II secretion system protein	-
ABLB96_RS12610 (ABLB96_12620)	-	2651021..2651629 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABLB96_RS12615 (ABLB96_12625)	-	2651667..2652440 (-)	774	WP_348897168.1	TatD family hydrolase	-
ABLB96_RS12620 (ABLB96_12630)	-	2652458..2652799 (-)	342	WP_348897169.1	PilZ domain-containing protein	-
ABLB96_RS12625 (ABLB96_12635)	-	2652811..2653791 (-)	981	WP_348897170.1	DNA polymerase III subunit delta'	-
ABLB96_RS12630 (ABLB96_12640)	kdsB	2653803..2654564 (-)	762	WP_348897171.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30436.76 Da
• Isoelectric Point: 9.8162

>NTDB_id=1006776 ABLB96_RS12595 WP_348897165.1 2649272..2650087(-) (xcpW) [Acinetobacter sp. XH1741]
MIKNKNVRTQDVAARLAARSDGVATNYFEHSSSSCAPTKLRFKGSHSRSIASHLAARSSSARLARASGFTLVELLVAIAI
FAILSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQYHIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQITVAGVSYEWIYSLNQGDLSLSQSGGT

Nucleotide

• Length: 816 bp

>NTDB_id=1006776 ABLB96_RS12595 WP_348897165.1 2649272..2650087(-) (xcpW) [Acinetobacter sp. XH1741]
ATGATAAAAAATAAAAATGTTCGCACTCAGGACGTAGCTGCTCGTCTTGCGGCACGATCGGATGGTGTGGCGACTAATTA
CTTCGAGCATAGCTCTTCGTCTTGCGCTCCGACAAAGCTTCGCTTTAAAGGCTCTCACTCTCGAAGCATAGCTTCTCATC
TTGCGGCACGATCGAGCAGTGCTCGATTAGCTCGTGCCTCAGGATTTACTTTAGTCGAGTTATTAGTAGCGATTGCTATC
TTTGCAATTTTATCTTTATTGGGATGGAAAATTTTCGATTATTTGCTCAAAGTACGTGATCGTAATGCTGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTACGAGATACATTGCAAATTATTCCCTTATCGGCAAATCAAG
GTGGACAACTTCATCCTGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGTAAGGCAGGTGTAACTGATCCTTTAAAA
CAAGGGTTATCACCATTTGAAAGAATTGAATATCGTTATGATGCAGACCAGAAAAAACTATATCGACTTAAATATAGTAA
TTTAAATACTTCGAATAGAGAGCAGCCTTTATCGAGTACGCTACTAAGTCAAGTCGAACAATATCACATTATGGTTTTGA
CTCCGCAGGAAGTAACCAAATGGCCTGAAGTGAATATTGATCCAACTAAACCCAATGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATTCAAATTACGGTGGCGGGGGTAAGTTATGAATGGATTTACAGTTTAAACCAAGGTGATTTATCACTTTCCCA
GTCAGGTGGGACATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.672	85.609	0.793