Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ABKJ37_RS08325 Genome accession   NZ_CP157386
Coordinates   1780624..1781892 (+) Length   422 a.a.
NCBI ID   WP_208927773.1    Uniprot ID   A0A0U2IUR2
Organism   Enterococcus rotai strain CMTB-CA6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1775624..1786892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ37_RS08305 - 1776019..1777587 (+) 1569 WP_348922982.1 PASTA domain-containing protein -
  ABKJ37_RS08310 - 1777808..1778611 (+) 804 WP_348922984.1 isoprenyl transferase -
  ABKJ37_RS08315 - 1778608..1779408 (+) 801 WP_348922986.1 phosphatidate cytidylyltransferase -
  ABKJ37_RS08320 - 1779467..1780627 (+) 1161 WP_348922988.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ABKJ37_RS08325 eeP 1780624..1781892 (+) 1269 WP_208927773.1 RIP metalloprotease RseP Regulator
  ABKJ37_RS08330 - 1781960..1783672 (+) 1713 WP_348922989.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46454.31 Da        Isoelectric Point: 5.1633

>NTDB_id=1006566 ABKJ37_RS08325 WP_208927773.1 1780624..1781892(+) (eeP) [Enterococcus rotai strain CMTB-CA6]
MKTIITFIIVFGILVLVHEFGHFFFAKRSGILVREFAIGMGPKIFAHQGKDGTTYTIRILPIGGYVRMAGMGEDETELAP
GMPLSVELNEQEEVVKINTSKKVQLTNSIPMEMLAADLEKELFIKGYVNGDESEEITYKVNHDATIIEQDGTEVRIAPID
VQFQSAKLWQRMLTNFAGPMNNFILALVLFTVYVFMQGGVTYTNTNLIGGIQPDSPAEKASLKADDRIVSIDGKSVDDWN
DFTKIIQDSPDKELNLMVESAGKTREVDITPKSQKSGKQEIGVIGILPPKKTGLADKLLGGVQTTLSSSMQIFKALKSLF
TGFSLDKLGGPVMMFQMSAEASKAGINTVIWLMAMLSVNLGIINLLPIPALDGGKIVLNIFEGLRGKPLSQEKEGLLTLI
GFGFIMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1006566 ABKJ37_RS08325 WP_208927773.1 1780624..1781892(+) (eeP) [Enterococcus rotai strain CMTB-CA6]
ATGAAAACAATCATTACATTTATTATTGTCTTTGGAATTCTTGTCTTAGTGCATGAATTTGGACATTTTTTCTTCGCAAA
GCGTTCAGGTATTTTAGTGCGAGAATTTGCGATTGGTATGGGACCAAAGATTTTTGCCCATCAAGGAAAAGATGGAACGA
CTTACACGATTCGGATATTGCCGATCGGAGGTTATGTCCGCATGGCAGGAATGGGAGAAGATGAAACAGAGTTAGCTCCT
GGAATGCCACTTTCTGTTGAGTTAAACGAGCAGGAAGAAGTTGTAAAAATCAATACAAGTAAGAAAGTCCAGTTAACTAA
TAGTATTCCGATGGAAATGTTAGCAGCTGATTTGGAAAAAGAGTTGTTCATCAAAGGATATGTCAATGGTGATGAGTCGG
AAGAAATCACCTATAAAGTGAATCATGATGCAACTATCATTGAGCAAGATGGAACCGAAGTTAGAATTGCACCAATCGAT
GTCCAATTCCAATCAGCAAAATTATGGCAACGAATGTTGACCAATTTTGCTGGACCGATGAATAATTTTATTCTAGCTCT
CGTGTTATTTACAGTTTATGTCTTTATGCAAGGTGGCGTGACGTACACAAATACCAATTTAATCGGTGGTATCCAACCAG
ACAGTCCGGCTGAAAAAGCAAGCTTGAAAGCAGATGATCGTATTGTATCGATTGATGGAAAATCTGTCGATGATTGGAAT
GATTTCACAAAGATCATTCAAGATAGCCCAGATAAAGAATTAAATCTGATGGTCGAATCTGCTGGCAAAACAAGAGAAGT
GGATATAACGCCTAAAAGTCAAAAATCTGGTAAGCAAGAAATTGGTGTGATAGGGATCTTGCCACCAAAGAAAACAGGTT
TAGCAGATAAGTTGCTTGGCGGTGTTCAAACAACATTAAGTAGTTCTATGCAAATTTTCAAAGCGCTAAAATCATTATTT
ACTGGATTTAGTTTAGATAAATTGGGTGGTCCGGTAATGATGTTCCAAATGTCTGCAGAAGCTTCAAAAGCAGGCATCAA
CACGGTGATCTGGCTAATGGCAATGTTATCAGTCAATCTAGGCATCATCAATTTACTGCCAATACCAGCACTTGATGGCG
GTAAGATCGTATTAAATATTTTTGAAGGGCTTAGAGGCAAACCTTTAAGTCAAGAAAAAGAAGGTTTACTAACATTGATT
GGTTTTGGTTTCATCATGCTATTGATGGTGTTAGTGACTTGGAATGATATTCAACGTTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-256)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U2IUR2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

53.864

100

0.545
  eeP Streptococcus thermophilus LMD-9

53.63

100

0.543

Multiple sequence alignment