Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   FQT45_RS10640 Genome accession   NZ_LR595858
Coordinates   703726..704097 (+) Length   123 a.a.
NCBI ID   WP_223837053.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 698726..709097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS03470 (NCTC10228_00704) ltrA 700088..701746 (+) 1659 WP_077322246.1 group II intron reverse transcriptase/maturase -
  FQT45_RS03480 (NCTC10228_00707) - 702537..703166 (+) 630 WP_077323075.1 ATP-binding cassette domain-containing protein -
  FQT45_RS10640 (NCTC10228_00708) comE/blpR 703726..704097 (+) 372 WP_223837053.1 hypothetical protein Regulator
  FQT45_RS03490 (NCTC10228_00709) - 704232..704480 (+) 249 WP_142355113.1 garvicin Q family class II bacteriocin -
  FQT45_RS03495 (NCTC10228_00710) - 704485..704784 (+) 300 WP_223837055.1 bacteriocin immunity protein -
  FQT45_RS03505 (NCTC10228_00711) - 705276..705575 (+) 300 WP_077323077.1 bacteriocin immunity protein -
  FQT45_RS03510 (NCTC10228_00712) mutM 705785..706606 (+) 822 WP_077323078.1 DNA-formamidopyrimidine glycosylase -
  FQT45_RS03515 (NCTC10228_00713) coaE 706603..707208 (+) 606 WP_077323079.1 dephospho-CoA kinase -
  FQT45_RS03520 (NCTC10228_00714) - 707513..709012 (+) 1500 WP_077323080.1 helicase HerA-like domain-containing protein -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 14348.64 Da        Isoelectric Point: 8.9470

>NTDB_id=1006445 FQT45_RS10640 WP_223837053.1 703726..704097(+) (comE/blpR) [Streptococcus pseudoporcinus strain NCTC10228]
MKERGNHQLFFLDIELGQNDKLGLSTAKKIKKIDPLAIIVFISSYSKFMPLTFRYQTEAFDFIDKNLCSKEKIERITKAV
NFVISNSHSIKTSFFFENQNNILQIPFEKILFIETSSESHHII

Nucleotide


Download         Length: 372 bp        

>NTDB_id=1006445 FQT45_RS10640 WP_223837053.1 703726..704097(+) (comE/blpR) [Streptococcus pseudoporcinus strain NCTC10228]
GTGAAAGAAAGAGGAAATCATCAATTATTTTTTCTAGATATTGAATTAGGTCAAAATGATAAGTTAGGACTATCAACTGC
AAAAAAAATTAAAAAAATTGATCCTTTAGCCATAATTGTGTTTATTTCAAGCTATTCAAAGTTTATGCCTTTAACTTTTA
GATATCAAACGGAAGCATTTGATTTTATTGATAAAAACCTATGCTCGAAAGAAAAAATTGAAAGAATAACAAAAGCAGTA
AATTTTGTTATTAGCAATAGTCATTCAATAAAGACTTCATTCTTTTTTGAAAATCAAAATAATATCCTACAAATTCCATT
TGAAAAAATTTTATTTATTGAAACTTCATCAGAGTCACATCATATTATCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

45.528

100

0.455
  comE/comE1 Streptococcus equinus JB1

36.641

100

0.39