Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   ABG082_RS14715 Genome accession   NZ_CP157353
Coordinates   2833194..2833334 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus sp. BS1807G30     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2828194..2838334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG082_RS14690 (ABG082_14690) - 2828516..2828905 (-) 390 WP_282833454.1 hotdog fold thioesterase -
  ABG082_RS14695 (ABG082_14695) comA 2828929..2829570 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  ABG082_RS14700 (ABG082_14700) comP 2829651..2831957 (-) 2307 WP_282833453.1 ATP-binding protein Regulator
  ABG082_RS14705 (ABG082_14705) comX 2831971..2832141 (-) 171 WP_017358941.1 competence pheromone ComX -
  ABG082_RS14710 (ABG082_14710) - 2832119..2833042 (-) 924 WP_282833452.1 polyprenyl synthetase family protein -
  ABG082_RS14715 (ABG082_14715) degQ 2833194..2833334 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ABG082_RS14720 (ABG082_14720) - 2833840..2834193 (+) 354 WP_017358939.1 hypothetical protein -
  ABG082_RS14725 (ABG082_14725) - 2834230..2835456 (-) 1227 WP_035701209.1 HDOD domain-containing protein -
  ABG082_RS14730 (ABG082_14730) - 2835596..2837065 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  ABG082_RS14735 (ABG082_14735) - 2837083..2837634 (-) 552 WP_272511068.1 isochorismatase family cysteine hydrolase -
  ABG082_RS14740 (ABG082_14740) - 2837695..2838102 (-) 408 WP_046344389.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=1006187 ABG082_RS14715 WP_003213123.1 2833194..2833334(-) (degQ) [Bacillus sp. BS1807G30]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1006187 ABG082_RS14715 WP_003213123.1 2833194..2833334(-) (degQ) [Bacillus sp. BS1807G30]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696

Multiple sequence alignment