Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABI198_RS01660 | Genome accession | NZ_CP157344 |
| Coordinates | 355704..356186 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain 2024CK-00537 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 350704..361186
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABI198_RS01650 (ABI198_01650) | - | 351213..352210 (+) | 998 | Protein_316 | IS4-like element ISAba1 family transposase | - |
| ABI198_RS01655 (ABI198_01655) | - | 352230..355691 (+) | 3462 | Protein_317 | PilC/PilY family type IV pilus protein | - |
| ABI198_RS01660 (ABI198_01660) | pilY2 | 355704..356186 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ABI198_RS01665 (ABI198_01665) | pilE | 356183..356608 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ABI198_RS01670 (ABI198_01670) | rpsP | 356755..357006 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABI198_RS01675 (ABI198_01675) | rimM | 357026..357574 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABI198_RS01680 (ABI198_01680) | trmD | 357620..358360 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABI198_RS01685 (ABI198_01685) | rplS | 358569..358937 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABI198_RS01690 (ABI198_01690) | - | 358990..359931 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABI198_RS01695 (ABI198_01695) | - | 360046..361080 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=1006066 ABI198_RS01660 WP_001046420.1 355704..356186(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00537]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1006066 ABI198_RS01660 WP_001046420.1 355704..356186(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00537]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |