Detailed information
Bioinformatically predicted
Overview
| Name | mecA | Type | Regulator |
| Locus tag | QUD44_RS02070 | Genome accession | NZ_AP027275 |
| Coordinates | 417616..418299 (+) | Length | 227 a.a. |
| NCBI ID | WP_096368632.1 | Uniprot ID | - |
| Organism | Lactococcus formosensis strain MS200408A | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 412616..423299
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUD44_RS02060 (LFMS200408A_03990) | rpoC | 412722..416369 (+) | 3648 | WP_185767511.1 | DNA-directed RNA polymerase subunit beta' | - |
| QUD44_RS02065 (LFMS200408A_04000) | - | 416460..417368 (-) | 909 | WP_096368633.1 | diacylglycerol kinase family protein | - |
| QUD44_RS02070 (LFMS200408A_04010) | mecA | 417616..418299 (+) | 684 | WP_096368632.1 | adaptor protein MecA | Regulator |
| QUD44_RS02075 (LFMS200408A_04020) | - | 418303..419559 (+) | 1257 | WP_096368631.1 | MraY family glycosyltransferase | - |
| QUD44_RS02080 (LFMS200408A_04030) | sufC | 419637..420407 (+) | 771 | WP_017368843.1 | Fe-S cluster assembly ATPase SufC | - |
| QUD44_RS02085 (LFMS200408A_04040) | sufD | 420477..421733 (+) | 1257 | WP_096368630.1 | Fe-S cluster assembly protein SufD | - |
| QUD44_RS02090 (LFMS200408A_04050) | - | 421733..422944 (+) | 1212 | WP_096368629.1 | cysteine desulfurase | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 26241.37 Da Isoelectric Point: 3.9817
>NTDB_id=100574 QUD44_RS02070 WP_096368632.1 417616..418299(+) (mecA) [Lactococcus formosensis strain MS200408A]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGAMTDTSTTETKETQVENKPDPDFVFYSLEFENMSQLLMAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETANSRETLQEYGEILINTRALEVLSKI
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGAMTDTSTTETKETQVENKPDPDFVFYSLEFENMSQLLMAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETANSRETLQEYGEILINTRALEVLSKI
Nucleotide
Download Length: 684 bp
>NTDB_id=100574 QUD44_RS02070 WP_096368632.1 417616..418299(+) (mecA) [Lactococcus formosensis strain MS200408A]
ATGCAATACGAAGAAATAAACGAAAAAACAATAAAGATTAGCCTAACCTTCCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAATCAATGGTGGAAAATCTTTTTTATGAGTTGGTAGAAGAGCTAGGACTTGAGGAACGGT
TCTCGTCAGGACTTTTAACCTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATCATTGTTACTGAAGAAAACATCGAT
ATTGATCCCAATAATCTTCCAGATGATCCTGAAGAATTTGAGCAGCTCATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAGCAATGACAGATACAAGTACAACTGAAACTAAAGAAACACAAGTAGAAAACAAACCAGACCCAG
ATTTTGTCTTCTATTCCCTAGAATTTGAAAATATGTCTCAACTTTTGATGGCAGTAAAAAATGTTAAAATCGATGCAGAA
GAGTCTGAACTTTATAGCTATCAAGACAAGTTTTACTTGATTATTTTAGATAATCAAAAATCAAAAGGAAAGACAGCTGT
AAGTTCCATGCGTGCCCGAATGTTAGAGTACGGACAGGAAACGGCCAACAGTCGCGAAACACTACAAGAATATGGCGAGA
TATTGATCAACACTCGTGCTTTGGAAGTTCTCTCAAAAATTTAA
ATGCAATACGAAGAAATAAACGAAAAAACAATAAAGATTAGCCTAACCTTCCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAATCAATGGTGGAAAATCTTTTTTATGAGTTGGTAGAAGAGCTAGGACTTGAGGAACGGT
TCTCGTCAGGACTTTTAACCTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATCATTGTTACTGAAGAAAACATCGAT
ATTGATCCCAATAATCTTCCAGATGATCCTGAAGAATTTGAGCAGCTCATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAGCAATGACAGATACAAGTACAACTGAAACTAAAGAAACACAAGTAGAAAACAAACCAGACCCAG
ATTTTGTCTTCTATTCCCTAGAATTTGAAAATATGTCTCAACTTTTGATGGCAGTAAAAAATGTTAAAATCGATGCAGAA
GAGTCTGAACTTTATAGCTATCAAGACAAGTTTTACTTGATTATTTTAGATAATCAAAAATCAAAAGGAAAGACAGCTGT
AAGTTCCATGCGTGCCCGAATGTTAGAGTACGGACAGGAAACGGCCAACAGTCGCGAAACACTACAAGAATATGGCGAGA
TATTGATCAACACTCGTGCTTTGGAAGTTCTCTCAAAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| mecA | Lactococcus lactis subsp. lactis strain DGCC12653 |
53.617 |
100 |
0.555 |
| mecA | Lactococcus lactis subsp. cremoris KW2 |
53.191 |
100 |
0.551 |