Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   FGL14_RS09105 Genome accession   NZ_LR594045
Coordinates   1794671..1795705 (-) Length   344 a.a.
NCBI ID   WP_138084013.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1789671..1800705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS09070 (NCTC9413_01877) - 1790296..1790598 (-) 303 WP_003052320.1 YlxQ-related RNA-binding protein -
  FGL14_RS09075 (NCTC9413_01878) - 1790591..1790887 (-) 297 WP_003062190.1 YlxR family protein -
  FGL14_RS09080 (NCTC9413_01879) nusA 1790903..1792060 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  FGL14_RS09085 (NCTC9413_01880) rimP 1792203..1792697 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  FGL14_RS09095 (NCTC9413_01882) trmB 1793180..1793815 (-) 636 WP_138084012.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL14_RS09100 (NCTC9413_01883) - 1793815..1794606 (-) 792 WP_003052472.1 phosphotransferase family protein -
  FGL14_RS09105 (NCTC9413_01884) pptB 1794671..1795705 (-) 1035 WP_138084013.1 ABC transporter permease Regulator
  FGL14_RS09110 (NCTC9413_01885) pptA 1795708..1796433 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  FGL14_RS09115 (NCTC9413_01886) - 1796505..1796924 (+) 420 WP_012767493.1 HIT family protein -
  FGL14_RS09120 (NCTC9413_01887) - 1796921..1797250 (+) 330 WP_138084014.1 chemotaxis protein -
  FGL14_RS09125 (NCTC9413_01888) - 1797408..1798676 (-) 1269 WP_041789135.1 LCP family protein -
  FGL14_RS09130 (NCTC9413_01889) - 1798688..1799209 (-) 522 WP_046176854.1 GNAT family N-acetyltransferase -
  FGL14_RS09135 (NCTC9413_01890) tsaE 1799202..1799645 (-) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40222.47 Da        Isoelectric Point: 10.2471

>NTDB_id=1005699 FGL14_RS09105 WP_138084013.1 1794671..1795705(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MKALFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLFGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQVERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRHFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNAYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVAVMGVITLFYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1005699 FGL14_RS09105 WP_138084013.1 1794671..1795705(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGTTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAATC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGTTGAACGCTCTGCCCTTGTAAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACACTTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTGCTGTTTATTTCTAACGCTTACCTATCAGTGGCTTTAGCCTTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGCGGTCATGGGAGTCATTACGCTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(156-327)

Bacterial ABC transporter protein EcsB (EcsB)

(2-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.512

100

0.465
  pptB Streptococcus salivarius strain HSISS4

46.221

100

0.462