Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FGL06_RS05465 Genome accession   NZ_LR594042
Coordinates   1077772..1078212 (-) Length   146 a.a.
NCBI ID   WP_126437902.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1072772..1083212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS05455 (NCTC8133_01102) rcrQ 1074192..1075964 (-) 1773 WP_074628589.1 ABC transporter ATP-binding protein Regulator
  FGL06_RS05460 (NCTC8133_01103) rcrP 1075954..1077768 (-) 1815 WP_094140470.1 ABC transporter ATP-binding protein Regulator
  FGL06_RS05465 (NCTC8133_01104) rcrR 1077772..1078212 (-) 441 WP_126437902.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FGL06_RS05470 (NCTC8133_01105) - 1078360..1078770 (-) 411 WP_027968635.1 peptide deformylase -
  FGL06_RS05475 (NCTC8133_01106) - 1078773..1079276 (-) 504 WP_126437903.1 GNAT family N-acetyltransferase -
  FGL06_RS05480 (NCTC8133_01107) gdhA 1079429..1080778 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  FGL06_RS05485 (NCTC8133_01108) - 1081008..1081505 (+) 498 WP_021142477.1 DUF308 domain-containing protein -
  FGL06_RS09250 (NCTC8133_01109) queF 1081544..1082035 (-) 492 WP_021142478.1 preQ(1) synthase -
  FGL06_RS09255 (NCTC8133_01110) queE 1082051..1082764 (-) 714 WP_186330482.1 7-carboxy-7-deazaguanine synthase QueE -
  FGL06_RS05495 (NCTC8133_01111) queD 1082757..1083203 (-) 447 WP_024343959.1 6-carboxytetrahydropterin synthase QueD -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17082.58 Da        Isoelectric Point: 7.4038

>NTDB_id=1005382 FGL06_RS05465 WP_126437902.1 1077772..1078212(-) (rcrR) [Streptococcus equinus strain NCTC8133]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDDFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1005382 FGL06_RS05465 WP_126437902.1 1077772..1078212(-) (rcrR) [Streptococcus equinus strain NCTC8133]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGTGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGACTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

52.448

97.945

0.514