Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FGL06_RS05455 Genome accession   NZ_LR594042
Coordinates   1074192..1075964 (-) Length   590 a.a.
NCBI ID   WP_074628589.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1069192..1080964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS05430 (NCTC8133_01097) - 1070181..1070861 (-) 681 WP_126437901.1 response regulator transcription factor -
  FGL06_RS05435 (NCTC8133_01098) - 1070877..1071494 (-) 618 WP_033152788.1 GTP pyrophosphokinase family protein -
  FGL06_RS05440 (NCTC8133_01099) - 1071584..1071745 (-) 162 Protein_1010 ABC transporter permease -
  FGL06_RS05445 (NCTC8133_01100) - 1071770..1072210 (-) 441 WP_074669201.1 MarR family winged helix-turn-helix transcriptional regulator -
  FGL06_RS09245 (NCTC8133_01101) - 1072213..1074084 (-) 1872 WP_164554312.1 hypothetical protein -
  FGL06_RS05455 (NCTC8133_01102) rcrQ 1074192..1075964 (-) 1773 WP_074628589.1 ABC transporter ATP-binding protein Regulator
  FGL06_RS05460 (NCTC8133_01103) rcrP 1075954..1077768 (-) 1815 WP_094140470.1 ABC transporter ATP-binding protein Regulator
  FGL06_RS05465 (NCTC8133_01104) rcrR 1077772..1078212 (-) 441 WP_126437902.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FGL06_RS05470 (NCTC8133_01105) - 1078360..1078770 (-) 411 WP_027968635.1 peptide deformylase -
  FGL06_RS05475 (NCTC8133_01106) - 1078773..1079276 (-) 504 WP_126437903.1 GNAT family N-acetyltransferase -
  FGL06_RS05480 (NCTC8133_01107) gdhA 1079429..1080778 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65286.26 Da        Isoelectric Point: 4.9717

>NTDB_id=1005380 FGL06_RS05455 WP_074628589.1 1074192..1075964(-) (rcrQ) [Streptococcus equinus strain NCTC8133]
MENKKKASFYSRMKPYIKGFQFPFILAVIGAIISATITVIGPDKLKEITNTIMDGLTPTKMGTIPGVDLDKVGEIAMTLA
ILYGVSAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLAQSLNQSLGTLVTSVVL
LFGSIFMMFHSNVSMALTAIGSVFVGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDDSHKERQLTAVKGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQISIDGIDTRNMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=1005380 FGL06_RS05455 WP_074628589.1 1074192..1075964(-) (rcrQ) [Streptococcus equinus strain NCTC8133]
ATGGAAAATAAGAAAAAAGCATCTTTCTATAGCAGAATGAAGCCATATATCAAAGGTTTCCAATTTCCATTCATCCTTGC
GGTGATTGGAGCGATTATTTCTGCGACTATCACGGTTATTGGACCTGATAAATTAAAAGAGATTACAAATACGATTATGG
ACGGATTGACACCTACGAAAATGGGAACTATTCCAGGTGTTGATTTGGATAAAGTCGGAGAAATTGCAATGACACTTGCT
ATTTTGTATGGTGTCTCAGCTGTGGTTGGTTATATTCAAAACTTTACAGTTGCCACAATCGTGCAACGTTTTTCACAACG
ATTGCGTGCAGCTATCCAAGTAAAAATTGACCGTGTTCCACTAAATTATTTTGATAGTCATTCACAAGGTGATACCCTTT
CTCGTGTGACAAACGATGTTGACTTACTTGCTCAATCGCTTAACCAAAGTTTGGGAACATTAGTGACTTCTGTTGTGCTT
TTGTTTGGTTCAATTTTCATGATGTTCCATTCAAACGTCAGCATGGCTTTGACAGCTATTGGCTCAGTTTTCGTTGGTTT
CCTTTTGGTTGTCGTCATTATGGGTTCATCACAACCATTGTTTAAACGTCAACAAAACAACTTGGCAGCAGTCAATGGTT
ATGTCGAAGAAATTTATTCTGGACACAATGTGGTAACAAGTTACAACGCGTCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAACCTTTATAAATCAATGTGGCAATCGCAATTCCTGTCTGGTATTATGATGCCGCTGATGATTTTCATTGG
TAACTTTGGTTACGTTATGGTCTGTGTTGTTGGTGCCGTCAAAGTTATTAACGGTGATATTACAATGGGTGATGTGGTTG
CCTTTATGACTTACGTTCGTATCTTCTCACAACCATTATCTCAAATTGCGCAAGCCTTCACACAAATGCAATCAGCAACT
GCTGCAATGAGCCGCGTCTTTGAATTCCTTGAAGAAGAGGAAATGGAAGATGATTCTCACAAAGAACGTCAATTGACAGC
TGTTAAAGGCGAGGTTGCCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACGATTATCCATGATTTCTCAGCTG
TTGCTAAACCAGGACAAAAAGTGGCTATCGTTGGGCCAACAGGTGCTGGTAAAACAACCATTGTTAATTTGCTTATGAAA
TTCTATGAAATCGATAAAGGTCAAATCTCTATCGATGGTATCGATACTCGTAACATGTCACGAGAAGAAGTTCACGACCA
ATTCTCGATGGTGCTTCAAGATACCTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAACATTA
CTGATGAACAAGTGGTTGCCGCAGCTAAAGCAGTCGGTGTTCACCACTTTATCATGACGCTTCCTGATGGATATGATACT
TATCTTGATGACTCAGTAACCCTTTCAATTGGTCAAAAACAACTTTTGACAATTGCGCGTGCGCTCTTGAAAAATGCTCC
GCTTCTTATCTTGGATGAGGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCTATGGATAAATTGA
TGGAAGGTCGCACTTCATTTGTAATTGCTCACCGTCTATCAACTATAAAAAACGCTGATCTTATCCTTGTTATGAAAGAT
GGTAACATCATCGAACAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(370-516)

ABC transporter transmembrane region (ABC_membrane)

(24-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.635

100

0.729