Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABI201_RS01645 | Genome accession | NZ_CP157260 |
| Coordinates | 352507..352989 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain 2024CK-00536 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 347507..357989
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABI201_RS01635 (ABI201_01635) | - | 348016..349013 (+) | 998 | Protein_313 | IS4-like element ISAba1 family transposase | - |
| ABI201_RS01640 (ABI201_01640) | - | 349033..352494 (+) | 3462 | Protein_314 | PilC/PilY family type IV pilus protein | - |
| ABI201_RS01645 (ABI201_01645) | pilY2 | 352507..352989 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ABI201_RS01650 (ABI201_01650) | pilE | 352986..353411 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ABI201_RS01655 (ABI201_01655) | rpsP | 353558..353809 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABI201_RS01660 (ABI201_01660) | rimM | 353829..354377 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABI201_RS01665 (ABI201_01665) | trmD | 354423..355163 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABI201_RS01670 (ABI201_01670) | rplS | 355372..355740 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABI201_RS01675 (ABI201_01675) | - | 355793..356734 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABI201_RS01680 (ABI201_01680) | - | 356849..357883 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=1005253 ABI201_RS01645 WP_001046420.1 352507..352989(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00536]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1005253 ABI201_RS01645 WP_001046420.1 352507..352989(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00536]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |