Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGL12_RS06390 Genome accession   NZ_LR594041
Coordinates   1325806..1326270 (-) Length   154 a.a.
NCBI ID   WP_138101249.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC9124     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1320806..1331270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS06375 (NCTC9124_01281) plsY 1321537..1322187 (+) 651 WP_138101247.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
  FGL12_RS06380 (NCTC9124_01282) nt5e 1322198..1324384 (-) 2187 WP_138101248.1 cell surface ecto-5'-nucleotidase Nt5e -
  FGL12_RS06385 (NCTC9124_01283) - 1324525..1325793 (-) 1269 WP_012000644.1 dihydroorotase -
  FGL12_RS06390 (NCTC9124_01284) mutX 1325806..1326270 (-) 465 WP_138101249.1 8-oxo-dGTP diphosphatase Machinery gene
  FGL12_RS06395 (NCTC9124_01285) - 1326279..1326932 (-) 654 WP_012000645.1 uracil-DNA glycosylase -
  FGL12_RS06400 (NCTC9124_01286) - 1326967..1327719 (-) 753 WP_012000646.1 DUF4336 domain-containing protein -
  FGL12_RS06405 (NCTC9124_01287) - 1327722..1329275 (-) 1554 WP_041789697.1 glycosyltransferase family 39 protein -
  FGL12_RS06410 (NCTC9124_01288) pyrE 1329410..1330039 (-) 630 WP_012000648.1 orotate phosphoribosyltransferase -
  FGL12_RS06415 (NCTC9124_01289) pyrF 1330119..1330811 (-) 693 WP_012000649.1 orotidine-5'-phosphate decarboxylase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17801.19 Da        Isoelectric Point: 4.3769

>NTDB_id=1005251 FGL12_RS06390 WP_138101249.1 1325806..1326270(-) (mutX) [Streptococcus gordonii strain NCTC9124]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKRIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1005251 FGL12_RS06390 WP_138101249.1 1325806..1326270(-) (mutX) [Streptococcus gordonii strain NCTC9124]
ATGGTTCAGTTAGCAACGATTTGTTATATTGATAATGGTCGGGAGTTTCTCATGCTACACCGCAACAAAAAGCCCAACGA
CGTTCATGCTGGGAAGCGGATTGGTGTCGGTGGCAAACTAGAGCGAGGAGAGACCCCGCAAGAATGCGCTGCACGTGAGA
TTTTAGAGGAAACAGGGCTAAAGGCCAAGCCTGTTCTCAAAGGTGTTATTACTTTTCCAGAATTTACTCCCGACTTGGAC
TGGTACACCTATGTTTTCAAGGTGACTGAGTTTGAGGGGGAACTGATTGACTGCAATGAAGGGACTTTGGAATGGGTGCC
CTATGACCAGGTTTTATCTAAACCAACCTGGGAAGGCGATCATACTTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCAGCAAAGTTTGTTTATGACGGGGATAAGCTCTTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

94.156

100

0.942

Multiple sequence alignment