Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | FGL12_RS06510 | Genome accession | NZ_LR594041 |
| Coordinates | 1346167..1347279 (-) | Length | 370 a.a. |
| NCBI ID | WP_012000665.1 | Uniprot ID | A8AXP5 |
| Organism | Streptococcus gordonii strain NCTC9124 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1341167..1352279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL12_RS06475 (NCTC9124_01301) | mnmE | 1341396..1342769 (+) | 1374 | WP_012000661.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| FGL12_RS06480 (NCTC9124_01302) | - | 1342920..1343489 (-) | 570 | WP_041789701.1 | TlpA disulfide reductase family protein | - |
| FGL12_RS06485 (NCTC9124_01303) | - | 1343929..1344627 (-) | 699 | WP_012000663.1 | LrgB family protein | - |
| FGL12_RS06490 (NCTC9124_01304) | - | 1344620..1345000 (-) | 381 | WP_008809214.1 | CidA/LrgA family protein | - |
| FGL12_RS06505 (NCTC9124_01307) | - | 1345776..1346114 (-) | 339 | WP_012000664.1 | metal-sulfur cluster assembly factor | - |
| FGL12_RS06510 (NCTC9124_01308) | rpoS | 1346167..1347279 (-) | 1113 | WP_012000665.1 | RNA polymerase sigma factor RpoD | Regulator |
| FGL12_RS06515 (NCTC9124_01309) | dnaG | 1347282..1349063 (-) | 1782 | WP_338419426.1 | DNA primase | - |
| FGL12_RS06520 (NCTC9124_01310) | mscL | 1349269..1349649 (+) | 381 | WP_012000667.1 | large conductance mechanosensitive channel protein MscL | - |
| FGL12_RS06525 (NCTC9124_01311) | rpsU | 1349757..1349933 (-) | 177 | WP_000048054.1 | 30S ribosomal protein S21 | - |
| FGL12_RS06530 (NCTC9124_01312) | - | 1350060..1350743 (-) | 684 | WP_012000668.1 | DUF4956 domain-containing protein | - |
| FGL12_RS06535 (NCTC9124_01313) | - | 1350754..1351485 (-) | 732 | WP_048774640.1 | polyphosphate polymerase domain-containing protein | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 42403.10 Da Isoelectric Point: 4.5140
>NTDB_id=1005252 FGL12_RS06510 WP_012000665.1 1346167..1347279(-) (rpoS) [Streptococcus gordonii strain NCTC9124]
MATKQKEVTTFDVQVAEFIRNHKKAGTVIDDEINDKLIIPFTLDADGIEDLLQRIQDAGISITDKEGNPSARVLHNEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAILVEQGDTEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
MATKQKEVTTFDVQVAEFIRNHKKAGTVIDDEINDKLIIPFTLDADGIEDLLQRIQDAGISITDKEGNPSARVLHNEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAILVEQGDTEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
Nucleotide
Download Length: 1113 bp
>NTDB_id=1005252 FGL12_RS06510 WP_012000665.1 1346167..1347279(-) (rpoS) [Streptococcus gordonii strain NCTC9124]
ATGGCTACAAAACAAAAAGAAGTAACAACATTTGACGTACAAGTTGCAGAATTTATTCGAAACCATAAAAAGGCTGGTAC
GGTAATTGATGATGAAATTAATGATAAATTGATTATTCCTTTTACCTTAGATGCAGATGGTATCGAAGATTTGTTGCAAC
GTATTCAAGATGCAGGGATTTCTATTACAGATAAAGAAGGGAATCCAAGTGCACGTGTTTTACACAACGAAGAGGAAGAA
GCAGAGCTAACTGATGAAGAACTTTTAGGTAGCAATTCAGCTAAAGTCAACGATCCTGTTCGTATGTATCTGAAAGAAAT
TGGAGTCGTTCCACTTTTGACAAACGAAGAAGAGCAAGAATTGGCAATCTTGGTAGAGCAGGGCGATACTGAGGCTAAGC
AACGTTTGGCTGAAGCCAACCTTCGCTTGGTAGTTTCTATTGCTAAACGTTATGTTGGACGTGGCATGCAGTTCCTTGAC
TTGATCCAAGAAGGAAATATGGGCTTGATGAAGGCCGTTGACAAGTTTGACTATACCAAAGGATTTAAGTTTTCAACGTA
TGCAACTTGGTGGATCCGTCAGGCCATTACCCGTGCGATTGCTGACCAAGCTAGAACAATCCGAATCCCAGTTCACATGG
TAGAAACGATTAATAAGCTAGTTCGTGAGCAACGCAATCTCTTGCAAGAATTAGGCCAAGATCCAACGCCTGAGCAGATT
GCTGAGCGTATGGATATGACACCAGATAAGGTTCGTGAGATTCTCAAGATTGCCCAGGAGCCAGTTTCTCTGGAAACACC
TATCGGTGAGGAAGATGATAGCCATCTGGGTGACTTTATCGAAGACGAAGTAATTGAAAATCCAGTTGATTACACAACTC
GTGTTGTTCTTCGTGAGCAGCTGGATGAAGTTTTAGACACTCTTACAGATCGTGAAGAAAATGTTCTTCGTCTGCGTTTT
GGTTTGGATGATGGTAAAATGCGGACCTTGGAAGATGTTGGTAAAGTTTTCAATGTGACACGTGAACGCATTCGCCAAAT
TGAAGCTAAAGCTCTACGTAAACTACGCCACCCAAGCCGTAGCAAGCCACTCCGTGATTTCATTGAAGATTAA
ATGGCTACAAAACAAAAAGAAGTAACAACATTTGACGTACAAGTTGCAGAATTTATTCGAAACCATAAAAAGGCTGGTAC
GGTAATTGATGATGAAATTAATGATAAATTGATTATTCCTTTTACCTTAGATGCAGATGGTATCGAAGATTTGTTGCAAC
GTATTCAAGATGCAGGGATTTCTATTACAGATAAAGAAGGGAATCCAAGTGCACGTGTTTTACACAACGAAGAGGAAGAA
GCAGAGCTAACTGATGAAGAACTTTTAGGTAGCAATTCAGCTAAAGTCAACGATCCTGTTCGTATGTATCTGAAAGAAAT
TGGAGTCGTTCCACTTTTGACAAACGAAGAAGAGCAAGAATTGGCAATCTTGGTAGAGCAGGGCGATACTGAGGCTAAGC
AACGTTTGGCTGAAGCCAACCTTCGCTTGGTAGTTTCTATTGCTAAACGTTATGTTGGACGTGGCATGCAGTTCCTTGAC
TTGATCCAAGAAGGAAATATGGGCTTGATGAAGGCCGTTGACAAGTTTGACTATACCAAAGGATTTAAGTTTTCAACGTA
TGCAACTTGGTGGATCCGTCAGGCCATTACCCGTGCGATTGCTGACCAAGCTAGAACAATCCGAATCCCAGTTCACATGG
TAGAAACGATTAATAAGCTAGTTCGTGAGCAACGCAATCTCTTGCAAGAATTAGGCCAAGATCCAACGCCTGAGCAGATT
GCTGAGCGTATGGATATGACACCAGATAAGGTTCGTGAGATTCTCAAGATTGCCCAGGAGCCAGTTTCTCTGGAAACACC
TATCGGTGAGGAAGATGATAGCCATCTGGGTGACTTTATCGAAGACGAAGTAATTGAAAATCCAGTTGATTACACAACTC
GTGTTGTTCTTCGTGAGCAGCTGGATGAAGTTTTAGACACTCTTACAGATCGTGAAGAAAATGTTCTTCGTCTGCGTTTT
GGTTTGGATGATGGTAAAATGCGGACCTTGGAAGATGTTGGTAAAGTTTTCAATGTGACACGTGAACGCATTCGCCAAAT
TGAAGCTAAAGCTCTACGTAAACTACGCCACCCAAGCCGTAGCAAGCCACTCCGTGATTTCATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
46.918 |
78.919 |
0.37 |