Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FGL12_RS05870 Genome accession   NZ_LR594041
Coordinates   1214649..1216385 (-) Length   578 a.a.
NCBI ID   WP_012000590.1    Uniprot ID   A8AXG4
Organism   Streptococcus gordonii strain NCTC9124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1209649..1221385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS05855 (NCTC9124_01175) - 1211117..1212139 (+) 1023 WP_012000587.1 YdcF family protein -
  FGL12_RS05860 (NCTC9124_01176) - 1212188..1212742 (-) 555 WP_012000588.1 GNAT family N-acetyltransferase -
  FGL12_RS05865 (NCTC9124_01177) rcrQ 1212858..1214639 (-) 1782 WP_012000589.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS05870 (NCTC9124_01178) rcrP 1214649..1216385 (-) 1737 WP_012000590.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS05875 (NCTC9124_01179) - 1216647..1217108 (-) 462 WP_012000592.1 hypothetical protein -
  FGL12_RS05880 (NCTC9124_01180) - 1217375..1218586 (-) 1212 WP_061600454.1 site-specific integrase -
  FGL12_RS05885 (NCTC9124_01181) - 1218579..1218830 (-) 252 WP_061600456.1 DUF3173 family protein -
  FGL12_RS11025 (NCTC9124_01182) - 1218924..1219820 (-) 897 WP_241974405.1 DnaB helicase C-terminal domain-containing protein -
  FGL12_RS11030 - 1219742..1220854 (-) 1113 WP_241974394.1 toprim domain-containing protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65272.26 Da        Isoelectric Point: 5.2111

>NTDB_id=1005249 FGL12_RS05870 WP_012000590.1 1214649..1216385(-) (rcrP) [Streptococcus gordonii strain NCTC9124]
MKYIWSYLRRYPKWLLLDFIGAIFFVIVNLGLPTVLARMIDEGINQGDTSRLYFWAFIMLLVIVAGVFGRIVLSYAAGKL
TTSMVRDMRNDLYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFAEQSLKMGVITPMMMLSSVFMIFLTSPSLAWIVA
ISVPFLAVVVWYVAVKTRPLSEKQQKTLDKINQYARENLTGLRVIRAFAREEFQEERFASENEIYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALQPLGSGELRIGDLVAFIEYSFHALLSFLFLSSLFTMYPRTAVSSERLKEVMDMPISINPNE
DGITETESHGYLEFDNVTFAYPGETESPVLHNVSFKAKPGETVAFIGSTGSGKSSLVQLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIAENLRYGKEDASHEELNQAADVAQAKEFIESREERFETHLAEGGSNLSGGQKQRLS
IARAVVKEPDIYIFDDSFSALDYKTDAILRRRLKEVTQNSTVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESNA
IYREIAQSQLNSQSLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=1005249 FGL12_RS05870 WP_012000590.1 1214649..1216385(-) (rcrP) [Streptococcus gordonii strain NCTC9124]
ATGAAATATATTTGGTCTTATTTAAGAAGATATCCTAAATGGCTCTTATTGGATTTCATAGGAGCGATTTTCTTTGTTAT
TGTAAATTTAGGCCTTCCTACAGTTCTTGCTCGTATGATTGATGAGGGGATTAACCAAGGAGATACCAGTCGTCTGTATT
TTTGGGCATTTATAATGTTATTAGTTATTGTAGCTGGAGTCTTTGGTAGAATTGTCCTGTCCTATGCAGCTGGCAAATTA
ACGACTAGTATGGTTCGGGATATGAGAAATGATCTTTACGCTAAGCTACAAGAGTATTCTCATCATGAATATGAACAGAT
TGGTGTGTCTTCGCTTGTGACACGGATAACAAGTGATGCTTTTGTTCTCATGCAATTTGCTGAGCAGAGCTTAAAAATGG
GGGTTATTACGCCCATGATGATGCTTTCAAGTGTTTTTATGATCTTTTTAACAAGTCCGTCCTTGGCTTGGATTGTTGCC
ATTTCTGTTCCTTTTTTGGCGGTAGTGGTTTGGTATGTGGCTGTTAAGACGCGTCCTCTATCAGAGAAGCAACAAAAAAC
ATTGGATAAAATTAACCAATATGCTCGAGAGAATTTAACAGGTCTACGGGTCATTCGTGCATTTGCCAGAGAAGAATTTC
AAGAGGAACGTTTTGCTTCAGAAAATGAAATCTATGCTGATAACTCCAATAAACTATTCAAACTGACAGGATTAACAGAA
CCTTTATTTGTTCAAATCATTATTGCCATGATTGTCGCAATTGTCTGGTTTGCTTTGCAACCTTTAGGAAGTGGAGAATT
AAGAATCGGTGATTTAGTTGCCTTTATTGAGTACAGTTTTCATGCTTTACTTTCTTTCTTATTTTTATCAAGTCTCTTTA
CCATGTATCCTAGAACAGCCGTTTCTAGTGAACGTCTGAAGGAAGTTATGGATATGCCTATCTCCATTAATCCTAATGAA
GATGGTATTACTGAAACTGAAAGTCATGGTTACCTGGAGTTTGATAATGTAACCTTTGCTTATCCAGGTGAGACGGAAAG
TCCAGTTCTTCATAATGTTTCTTTCAAGGCCAAACCTGGTGAAACTGTTGCCTTTATTGGTTCTACAGGATCAGGTAAGT
CTTCCTTAGTACAATTGATACCACGTTTTTATGATGTTACTTTAGGGAAAATTTTAGTTGATGGAGTTGATGTCAGAGAC
TATCAGCTTAAAGCTTTACGTCAAAAGATTGGTTTCATTCCCCAAAAAGCTTTGCTTTTTACTGGTACCATCGCAGAAAA
CTTGAGGTATGGTAAAGAAGATGCCAGTCATGAAGAACTAAATCAAGCTGCAGATGTGGCTCAAGCTAAAGAATTTATCG
AAAGTCGCGAAGAGAGATTTGAGACTCATCTTGCTGAAGGAGGAAGCAATCTTTCTGGTGGTCAAAAACAACGTCTGTCA
ATCGCTCGTGCTGTTGTAAAAGAGCCGGATATATATATCTTTGATGATTCGTTTTCAGCTCTCGACTACAAGACGGATGC
TATCTTACGTCGTCGTTTGAAAGAAGTAACCCAGAATTCAACGGTTTTAATCGTTGCCCAGCGGGTTGGCACGATTATGG
ATGCAGATCAGATTATCGTTTTGGATAAGGGTGAAATCGTTGGTCGGGGAAGACATGAAGAACTCATGGAATCCAATGCC
ATTTATCGAGAAATTGCTCAATCCCAGCTTAACAGTCAATCATTAACAGAAGAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AXG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.93

93.772

0.365

Multiple sequence alignment