Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FGL12_RS05865 Genome accession   NZ_LR594041
Coordinates   1212858..1214639 (-) Length   593 a.a.
NCBI ID   WP_012000589.1    Uniprot ID   A8AXG3
Organism   Streptococcus gordonii strain NCTC9124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1207858..1219639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS05850 (NCTC9124_01174) brnQ 1209594..1210922 (-) 1329 WP_012000586.1 branched-chain amino acid transport system II carrier protein -
  FGL12_RS05855 (NCTC9124_01175) - 1211117..1212139 (+) 1023 WP_012000587.1 YdcF family protein -
  FGL12_RS05860 (NCTC9124_01176) - 1212188..1212742 (-) 555 WP_012000588.1 GNAT family N-acetyltransferase -
  FGL12_RS05865 (NCTC9124_01177) rcrQ 1212858..1214639 (-) 1782 WP_012000589.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS05870 (NCTC9124_01178) rcrP 1214649..1216385 (-) 1737 WP_012000590.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS05875 (NCTC9124_01179) - 1216647..1217108 (-) 462 WP_012000592.1 hypothetical protein -
  FGL12_RS05880 (NCTC9124_01180) - 1217375..1218586 (-) 1212 WP_061600454.1 site-specific integrase -
  FGL12_RS05885 (NCTC9124_01181) - 1218579..1218830 (-) 252 WP_061600456.1 DUF3173 family protein -

Sequence

Protein


Download         Length: 593 a.a.        Molecular weight: 66544.89 Da        Isoelectric Point: 5.5103

>NTDB_id=1005248 FGL12_RS05865 WP_012000589.1 1212858..1214639(-) (rcrQ) [Streptococcus gordonii strain NCTC9124]
MEKKHSFARLWSYLKVYKVSVILAVFLKILSVVMSVLEPFVLGLAITELTSNLLDMAKGVEGAHINASYVGLVMVLYFVR
ALFYEIGSYYSNYFMTNAVQNTIRDLRNELSHKINQIPVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVVNAVFTIS
LVMFMVLYLNLSLALLVIISIPLTYFAANFILKKSQPYFKKQADILGEMNGFVQENLSGFNVLKLYGREEASSQDFEAIT
QNLQEVGFKASFISGLMMPVLNAISDLTYLIVAILGGLQVISGQLTIGNMQAFVQYVWQVSQPIQNLTQLAGQLQSAKSS
LDRVFQVLDEADEVNDVSERLKHDLTGQVSFHDVDFQYVADKPLIRNFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYD
VTKGAITVDGHDIRDLCRQDYRKQFGMVLQDAWLYEGTIKQNLRFGNLEATDEEIVEAAKAANVDHFIRTLPGGYNMEMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHESLLAAKGFYYELYMSQFSKKEETSA

Nucleotide


Download         Length: 1782 bp        

>NTDB_id=1005248 FGL12_RS05865 WP_012000589.1 1212858..1214639(-) (rcrQ) [Streptococcus gordonii strain NCTC9124]
ATGGAGAAAAAACATTCTTTTGCTCGCTTATGGAGCTATTTAAAAGTCTATAAAGTATCTGTCATTTTAGCTGTTTTCCT
CAAGATTCTCAGTGTTGTTATGAGTGTTTTGGAGCCATTTGTGTTGGGGCTTGCAATTACAGAATTGACTAGCAATCTTT
TAGATATGGCTAAGGGAGTTGAAGGAGCTCACATTAATGCTAGTTATGTTGGTTTGGTCATGGTCTTGTACTTTGTTCGA
GCACTCTTCTATGAAATCGGTTCTTACTATTCCAACTATTTTATGACCAACGCTGTACAAAATACAATTCGTGATTTGAG
AAATGAACTCAGCCATAAAATTAATCAGATTCCCGTATCTTATTTTGATAAGCACCAGTTTGGGGATTTACTGGGCAGAT
TTACTAGTGATGTAGAGACGGTCTCAAACGCCTTGCAACAAAGTTTTTTGCAAGTAGTGAATGCTGTATTTACTATTTCT
TTGGTTATGTTTATGGTTCTGTATCTAAACCTGTCACTTGCTCTGCTTGTGATTATCAGTATTCCTTTGACCTATTTTGC
GGCAAACTTTATATTGAAGAAATCTCAACCTTACTTCAAAAAGCAGGCTGATATTTTGGGGGAAATGAATGGTTTTGTCC
AAGAGAATCTAAGCGGTTTTAACGTTCTAAAACTCTATGGAAGAGAAGAAGCTTCTAGTCAAGACTTTGAAGCAATTACA
CAAAATCTTCAAGAAGTAGGTTTTAAGGCTAGTTTTATTTCTGGCTTGATGATGCCAGTTTTAAACGCGATTTCTGATTT
AACCTATCTGATTGTAGCAATCTTGGGAGGTTTACAAGTAATCTCTGGACAATTAACAATTGGGAATATGCAAGCTTTTG
TTCAATATGTCTGGCAGGTTAGTCAGCCGATTCAAAACTTAACACAGCTAGCAGGCCAATTGCAAAGCGCCAAGTCTTCT
TTGGATCGGGTTTTCCAAGTTCTGGACGAGGCAGATGAAGTCAATGATGTGTCTGAAAGACTGAAACATGATTTAACTGG
TCAGGTCAGCTTTCATGATGTAGACTTCCAGTATGTGGCAGATAAGCCACTTATTCGGAACTTCAATCTTGAAGTTAAAC
CAGGTGAGATGGTGGCCATTGTCGGTCCAACAGGAGCTGGTAAGACGACTCTGATCAATCTTCTTATGCGTTTCTATGAT
GTTACTAAAGGTGCGATTACTGTCGACGGACATGATATTCGAGACCTTTGCCGTCAAGACTACCGTAAACAGTTTGGTAT
GGTGTTGCAAGATGCTTGGCTTTACGAGGGGACGATCAAGCAAAATCTTCGCTTCGGGAACTTAGAGGCTACTGATGAAG
AAATTGTAGAAGCAGCCAAGGCAGCTAATGTGGATCACTTTATCCGTACTTTACCAGGTGGATATAACATGGAAATGAAC
CAAGAGTCAAGCAATATCTCTCTGGGTCAGAAACAGTTGCTTACGATTGCACGAGCGCTTTTAGCAGATCCTAAGATTCT
GATTTTGGATGAAGCGACCTCATCAGTAGATACACGGCTGGAGCTCTTGATTCAGAAGGCTATGAAGACACTCATGCAGG
GGCGGACCAGTTTTGTCATTGCTCACCGACTGTCGACCATTCAGGAGGCAGATAAGATTTTGGTGCTCAAGGATGGTCAG
ATTATCGAGCAAGGCAATCATGAGTCCCTCTTGGCTGCAAAAGGATTCTATTATGAATTGTACATGAGTCAATTCTCCAA
AAAAGAAGAAACTAGCGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(366-514)

ABC transporter transmembrane region (ABC_membrane)

(21-303)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AXG3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.351

100

0.444

Multiple sequence alignment