Detailed information NTG1005218

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABI173_RS11000
• Genome accession: NZ_CP157257
• Coordinates: 2241829..2242530 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00462
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2236829..2247530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI173_RS10970 (ABI173_10970)	-	2237135..2237578 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABI173_RS10975 (ABI173_10975)	tadA	2237648..2238151 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABI173_RS10980 (ABI173_10980)	-	2238158..2239282 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABI173_RS10985 (ABI173_10985)	ung	2239279..2239992 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABI173_RS10990 (ABI173_10990)	-	2240043..2240639 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABI173_RS10995 (ABI173_10995)	gspK	2240870..2241829 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABI173_RS11000 (ABI173_11000)	xcpW	2241829..2242530 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABI173_RS11005 (ABI173_11005)	xcpV	2242530..2242910 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABI173_RS11010 (ABI173_11010)	-	2242900..2243454 (-)	555	WP_000841373.1	type II secretion system protein	-
ABI173_RS11015 (ABI173_11015)	-	2243464..2244072 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABI173_RS11020 (ABI173_11020)	-	2244110..2244883 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABI173_RS11025 (ABI173_11025)	-	2244901..2245242 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABI173_RS11030 (ABI173_11030)	-	2245254..2246234 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABI173_RS11035 (ABI173_11035)	kdsB	2246246..2247007 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1005218 ABI173_RS11000 WP_000594589.1 2241829..2242530(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00462]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1005218 ABI173_RS11000 WP_000594589.1 2241829..2242530(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00462]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996