Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGK97_RS03835 Genome accession   NZ_LR594037
Coordinates   768565..769308 (+) Length   247 a.a.
NCBI ID   WP_021001599.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC11064     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 763565..774308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS03820 (NCTC11064_00774) - 764821..765780 (+) 960 WP_003024878.1 CPBP family intramembrane glutamic endopeptidase -
  FGK97_RS03825 (NCTC11064_00775) uvrB 765871..767859 (+) 1989 WP_021001597.1 excinuclease ABC subunit UvrB Machinery gene
  FGK97_RS03830 (NCTC11064_00776) - 767890..768435 (+) 546 WP_021001598.1 DUF1697 domain-containing protein -
  FGK97_RS03835 (NCTC11064_00777) pptA 768565..769308 (+) 744 WP_021001599.1 ABC transporter ATP-binding protein Regulator
  FGK97_RS03840 (NCTC11064_00778) - 769298..770938 (+) 1641 WP_021001600.1 hypothetical protein -
  FGK97_RS03845 (NCTC11064_00779) hemW 771063..772193 (+) 1131 WP_138099385.1 radical SAM family heme chaperone HemW -
  FGK97_RS03850 (NCTC11064_00780) - 772197..772928 (+) 732 WP_003024864.1 acyl-[acyl-carrier-protein] thioesterase -
  FGK97_RS03855 (NCTC11064_00781) - 772951..773724 (+) 774 WP_106079230.1 TIGR01457 family HAD-type hydrolase -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27682.64 Da        Isoelectric Point: 4.9287

>NTDB_id=1005153 FGK97_RS03835 WP_021001599.1 768565..769308(+) (pptA) [Streptococcus anginosus strain NCTC11064]
MIEFKDVTKVYDDKIALNHLNLTLQSGEIVGLIGHNGAGKSTTIKSLVSVINPTHGQIFVDGKELAANRLAIKKKIGYVA
DSPDLFLRLTANEFWELVGTSYDMSPSDYEKRLTELLELFDFTAHRYEVIESFSHGMRQKVFVIGALLSDPDIWVLDEPL
TGLDPQAAFDLKQMMREHADKGNTVLFSTHVLEVAEQLCDRIAILKKGELLFYGTIEELKSQHPEKSLESIYLSLAGRRE
EVSPDAS

Nucleotide


Download         Length: 744 bp        

>NTDB_id=1005153 FGK97_RS03835 WP_021001599.1 768565..769308(+) (pptA) [Streptococcus anginosus strain NCTC11064]
ATGATTGAATTTAAGGATGTTACAAAAGTGTACGATGACAAGATAGCGTTGAATCATCTGAATTTAACGCTTCAGAGTGG
AGAAATTGTAGGATTAATTGGACACAATGGTGCTGGAAAATCAACAACGATCAAATCATTGGTTAGTGTGATTAATCCAA
CGCATGGTCAGATTTTTGTGGATGGCAAGGAATTAGCAGCTAATCGGTTGGCAATCAAGAAGAAAATTGGTTATGTAGCT
GATTCGCCAGATTTATTCTTACGTCTGACAGCAAATGAATTCTGGGAATTGGTTGGAACTTCTTATGATATGAGTCCTTC
AGATTATGAGAAACGTTTAACGGAGCTACTGGAATTATTTGATTTTACAGCTCATCGCTATGAAGTTATTGAATCGTTTT
CACATGGAATGCGACAAAAAGTATTTGTCATTGGTGCTCTTTTGTCTGATCCAGATATCTGGGTGTTGGATGAGCCTTTA
ACTGGTTTGGATCCGCAGGCGGCTTTTGACCTCAAACAAATGATGCGAGAGCATGCAGACAAAGGAAATACTGTTTTGTT
CTCAACCCATGTTTTAGAAGTGGCAGAGCAATTGTGTGACCGTATTGCCATTCTCAAAAAGGGAGAATTGTTGTTTTACG
GTACGATTGAGGAATTGAAAAGTCAACATCCTGAAAAATCCTTAGAAAGTATTTACCTCAGTTTGGCAGGTCGTAGAGAA
GAGGTGAGTCCTGATGCGTCTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

38.235

96.356

0.368
  pptA Streptococcus thermophilus LMD-9

37.815

96.356

0.364

Multiple sequence alignment