Detailed information NTG1004883

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FGK95_RS10465
• Genome accession: NZ_LR590625
• Coordinates: 2099737..2100840 (-)
• Length: 367 a.a.
• NCBI ID: WP_093999512.1
• Uniprot ID: -
• Organism: Streptococcus canis strain B700072
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2094737..2105840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS10440 (SAMEA5186854_02099)	trpS	2094963..2095985 (+)	1023	WP_003045853.1	tryptophan--tRNA ligase	-
FGK95_RS10445 (SAMEA5186854_02100)	guaB	2096361..2097842 (+)	1482	WP_003045855.1	IMP dehydrogenase	-
FGK95_RS10450 (SAMEA5186854_02101)	-	2098005..2098868 (+)	864	WP_003045857.1	GRP family sugar transporter	-
FGK95_RS10455	tnpA	2099070..2099534 (+)	465	Protein_1983	IS200/IS605 family transposase	-
FGK95_RS10465 (SAMEA5186854_02104)	recF	2099737..2100840 (-)	1104	WP_093999512.1	DNA replication/repair protein RecF	Machinery gene
FGK95_RS10470 (SAMEA5186854_02105)	yaaA	2100842..2101255 (-)	414	WP_093999511.1	S4 domain-containing protein YaaA	-
FGK95_RS10475	-	2101335..2102234 (-)	900	Protein_1986	IS30 family transposase	-
FGK95_RS10480	-	2102457..2103281 (-)	825	Protein_1987	DDE-type integrase/transposase/recombinase	-
FGK95_RS10490 (SAMEA5186854_02111)	rlmH	2103601..2104080 (-)	480	WP_093999375.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
FGK95_RS10495 (SAMEA5186854_02112)	htrA	2104293..2105516 (+)	1224	WP_093999374.1	S1C family serine protease	Regulator

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 41965.91 Da
• Isoelectric Point: 9.2281

>NTDB_id=1004883 FGK95_RS10465 WP_093999512.1 2099737..2100840(-) (recF) [Streptococcus canis strain B700072]
MWIKELQLKHYRNYNQLSAEFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRIDKELIHFDQSSVSLSGKISRISGT
VDLEINLSDKGRVTKINSLKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDVDLGQIKPIYLSDLTHYNHVLKQR
NTYLKSAQHIDADFLAVLDEQLADYGSRVMEHRSDFINALEKEANRHHQAISNDLENLSLAYDSSVPFENKGEIYQQFLQ
LLKKNHQKDSFRKTTSVGPHRDDLAFYINDMNANFASQGQHRSLILSLKMAEVSLMKDLTGDNPILLLDDVMSELDNTRQ
TKLLKTVMKENVQTFITTTSLDHLSQLPKNIRIFQVTKGTIRVDSKM

Nucleotide

• Length: 1104 bp

>NTDB_id=1004883 FGK95_RS10465 WP_093999512.1 2099737..2100840(-) (recF) [Streptococcus canis strain B700072]
ATGTGGATCAAAGAATTACAACTAAAACATTATCGTAATTACAACCAGCTTTCTGCCGAATTTTCTTCTGGTTTAAATGT
CTTTATTGGTAATAATGCTCAAGGAAAAACCAATTTTCTGGAAGCCATCTATTTTTTATCGCTCACAAGAAGCCATCGAA
CGAGGATTGATAAAGAATTAATCCACTTTGACCAGTCAAGTGTCTCCCTTTCTGGTAAGATTAGCCGCATTAGTGGTACT
GTTGATTTGGAAATTAACCTTTCAGACAAAGGACGTGTGACAAAAATCAATTCCTTAAAGCAAGCGAAATTGTCTGACTA
CATTGGAACCATGATGGTTGTGCTCTTTGCACCAGAAGATTTACAACTGGTCAAAGGAGCTCCTAGTCTGCGCCGCAAAT
TCATTGACGTTGATTTGGGACAAATCAAGCCTATTTATTTATCAGATTTGACACATTACAATCATGTACTGAAGCAACGT
AACACTTATTTAAAGAGTGCCCAACATATTGACGCAGATTTTCTAGCTGTTTTAGATGAACAATTAGCTGATTATGGCAG
CCGAGTAATGGAACATCGCAGTGATTTTATCAATGCCCTAGAAAAAGAGGCTAATAGGCACCATCAAGCCATCTCAAACG
ATTTAGAAAACCTTTCACTTGCTTATGACTCCTCAGTTCCTTTTGAAAACAAAGGGGAAATTTACCAGCAATTCTTACAG
CTACTTAAAAAAAATCATCAGAAAGATTCCTTCCGTAAAACTACCAGTGTGGGCCCACATCGAGATGATCTGGCTTTTTA
CATTAATGATATGAATGCTAATTTTGCAAGCCAAGGACAACACCGTAGCCTTATACTCTCTTTAAAAATGGCTGAAGTCA
GTTTAATGAAAGACTTGACAGGAGATAATCCTATCCTTTTATTGGATGATGTCATGAGTGAGTTAGACAATACACGGCAA
ACAAAGCTACTTAAAACAGTGATGAAAGAAAATGTCCAAACTTTTATCACAACAACAAGCTTGGATCATCTATCACAATT
ACCAAAAAATATCCGTATTTTTCAGGTGACAAAAGGAACCATTCGAGTTGATTCCAAAATGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.466	99.455	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	43.28	100	0.439