Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FGK95_RS09495 Genome accession   NZ_LR590625
Coordinates   1904570..1905019 (-) Length   149 a.a.
NCBI ID   WP_003045511.1    Uniprot ID   A0A2D4DR43
Organism   Streptococcus canis strain B700072     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1899570..1910019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS09475 (SAMEA5186854_01907) - 1899648..1900094 (-) 447 WP_093999365.1 dUTP diphosphatase -
  FGK95_RS09480 (SAMEA5186854_01908) - 1900200..1900967 (-) 768 WP_003045505.1 epoxyqueuosine reductase QueH -
  FGK95_RS09485 (SAMEA5186854_01909) - 1901084..1902868 (-) 1785 WP_093999359.1 ABC transporter ATP-binding protein -
  FGK95_RS09490 (SAMEA5186854_01910) rcrP 1902868..1904577 (-) 1710 WP_093999358.1 ABC transporter ATP-binding protein Regulator
  FGK95_RS09495 (SAMEA5186854_01911) rcrR 1904570..1905019 (-) 450 WP_003045511.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FGK95_RS09500 (SAMEA5186854_01912) - 1905319..1906335 (+) 1017 WP_138114326.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FGK95_RS09505 (SAMEA5186854_01913) galU 1906367..1907272 (+) 906 WP_093999356.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  FGK95_RS09510 (SAMEA5186854_01914) - 1907534..1908205 (-) 672 WP_093999355.1 rhomboid family intramembrane serine protease -
  FGK95_RS09515 (SAMEA5186854_01915) - 1908202..1908729 (-) 528 WP_039994714.1 5-formyltetrahydrofolate cyclo-ligase -
  FGK95_RS11210 - 1909235..1909384 (-) 150 WP_093999354.1 LPXTG cell wall anchor domain-containing protein -
  FGK95_RS10610 - 1909535..1909675 (-) 141 WP_156667778.1 hypothetical protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17385.19 Da        Isoelectric Point: 9.6257

>NTDB_id=1004876 FGK95_RS09495 WP_003045511.1 1904570..1905019(-) (rcrR) [Streptococcus canis strain B700072]
MSRVIADLRELTHQIEQISDEIARKYNLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIQ
VLPSQADKRYKQIVLAQAGKDKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENNA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=1004876 FGK95_RS09495 WP_003045511.1 1904570..1905019(-) (rcrR) [Streptococcus canis strain B700072]
ATGTCACGAGTAATTGCAGATTTGCGCGAATTAACGCATCAGATTGAGCAAATTAGCGATGAAATTGCTAGGAAATACAA
TTTGGAACATTTAGCAGGTCCTCAGGGACATGTGTTGGTTTTTCTATCCAAACATCAAGATCAGGAAATCTTTGTCAAGG
ATATTGAAAAAGAACTGCAGATTTCAAAATCGGTCACTAGCAATTTAGTCAAGCGCATGGTCAAAAACGGCTTTATCCAA
GTACTTCCCTCGCAGGCTGACAAGCGCTATAAACAAATTGTTTTGGCTCAGGCGGGTAAGGATAAATTACCCTTGCTTCA
AGAATGTCGTAAGGATATTGAACATTATTTTTTTAAGGAAATTACGAGAGAAGAGTTGCTGACAGTCAAAAAGGTGATTC
AGCAGCTCAAGCAAAATATGCTAACTTACAAAGGAGAGAACAATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DR43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43

Multiple sequence alignment