Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FGK95_RS09490 Genome accession   NZ_LR590625
Coordinates   1902868..1904577 (-) Length   569 a.a.
NCBI ID   WP_093999358.1    Uniprot ID   -
Organism   Streptococcus canis strain B700072     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1897868..1909577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS09470 (SAMEA5186854_01906) radA 1898189..1899550 (-) 1362 WP_093999360.1 DNA repair protein RadA Machinery gene
  FGK95_RS09475 (SAMEA5186854_01907) - 1899648..1900094 (-) 447 WP_093999365.1 dUTP diphosphatase -
  FGK95_RS09480 (SAMEA5186854_01908) - 1900200..1900967 (-) 768 WP_003045505.1 epoxyqueuosine reductase QueH -
  FGK95_RS09485 (SAMEA5186854_01909) - 1901084..1902868 (-) 1785 WP_093999359.1 ABC transporter ATP-binding protein -
  FGK95_RS09490 (SAMEA5186854_01910) rcrP 1902868..1904577 (-) 1710 WP_093999358.1 ABC transporter ATP-binding protein Regulator
  FGK95_RS09495 (SAMEA5186854_01911) rcrR 1904570..1905019 (-) 450 WP_003045511.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FGK95_RS09500 (SAMEA5186854_01912) - 1905319..1906335 (+) 1017 WP_138114326.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FGK95_RS09505 (SAMEA5186854_01913) galU 1906367..1907272 (+) 906 WP_093999356.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  FGK95_RS09510 (SAMEA5186854_01914) - 1907534..1908205 (-) 672 WP_093999355.1 rhomboid family intramembrane serine protease -
  FGK95_RS09515 (SAMEA5186854_01915) - 1908202..1908729 (-) 528 WP_039994714.1 5-formyltetrahydrofolate cyclo-ligase -
  FGK95_RS11210 - 1909235..1909384 (-) 150 WP_093999354.1 LPXTG cell wall anchor domain-containing protein -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63132.80 Da        Isoelectric Point: 5.9468

>NTDB_id=1004875 FGK95_RS09490 WP_093999358.1 1902868..1904577(-) (rcrP) [Streptococcus canis strain B700072]
MLKEAILRYKWYVLGSLLMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYDVGRLLLIIALVGLVSGTLNTVLSAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDITQIQNLVMMLFQVLLRLPILFMGSFIMAVQTLPDLWWVIVLMV
ILIGIIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKEASKELLDLNLFIGYGFSLMQPTL
MLVSYLAVYVSIYMVSGMVETDPAVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRIKEVLNTEPAMTFETDQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFSIEPGQMIGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPITSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAMEFIDRMDGRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSEKLVQEALNKELKGTTTVIIAQKISSVVKADKILVLDQGQLLGEGTHAELLANNAVYREIY
DTQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=1004875 FGK95_RS09490 WP_093999358.1 1902868..1904577(-) (rcrP) [Streptococcus canis strain B700072]
ATGCTTAAAGAGGCAATCCTGCGTTACAAATGGTACGTTTTAGGCTCGCTACTGATGATTATTGGGGTGGTTGCGAGTAG
TCTGTTACAACCTCATTATTTAAAAGATGTGTTAAGTGCCGTTATTCAAAATAACCAAGATAAGATTTATGATGTGGGGA
GGTTGTTGCTTATCATTGCCCTTGTGGGCTTGGTTTCTGGAACCCTTAATACGGTTTTATCGGCTAAGATTGCTCAAGGG
GTTTCAGCTGATATTCGTGAGAAGACTTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTCGAGGCATTTAATGCTGG
GAACCTTGTCGTTCGGATGACCAATGATATTACTCAAATTCAAAATTTGGTGATGATGCTGTTTCAGGTTCTCCTTCGAT
TGCCAATTCTCTTTATGGGCTCTTTTATTATGGCAGTGCAGACCTTACCTGACTTGTGGTGGGTCATTGTGCTGATGGTC
ATTTTAATTGGGATAATCATGGCTTTGGTCATGAGTCAGATGGGACCACGTTTTGGGAAATTCCAAAAATTGATGGACAA
GATTAATCGTATTGCCAAGGAAAACCTTCGCGGGGTGCGTGTGGTTAAATCCTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAGCTTCTAAAGAACTATTGGACTTGAATCTTTTTATCGGCTATGGCTTTTCGTTGATGCAACCAACTTTG
ATGTTAGTATCTTATTTGGCAGTTTATGTATCCATCTACATGGTTTCTGGCATGGTTGAAACAGACCCAGCAGTTATTGG
AAATATTGCTTCCTTTATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCCA
GTCGTGCCTTTGTTTCTATTGGTCGTATCAAAGAAGTGCTCAATACTGAGCCAGCCATGACCTTTGAAACTGATCAAGAA
GAAGAGGTTTCAGGTAGTATTGTGTTTGAGGATGTGAGCTTTACCTATCCTAATGATGATGAACCGACCTTGCGCCATAT
TTCCTTTAGCATTGAACCTGGTCAAATGATTGGCGTTGTGGGAGCTACTGGGGCTGGAAAGTCAACACTGGCACAGCTTA
TTCCTCGCTTGTTTGACCCACAAGAAGGTCAAATTTTGCTGGGAGGCAAACCGATTACCTCCCTCAGTCAAGCGACTCTT
CGTCAGACGGTTTCGATTGTGTTGCAAAAGGCTATTCTCTTTTCAGGAACTATTGCGGACAACCTTCGCCAGGGGTCAGC
GACTGCAGATGATTATGCCATGGAACGGGCAGCACGTATTGCGCAGGCTATGGAATTTATTGACCGCATGGATGGTCGCT
ATGAGAGCCAAGTTGAAGAACGAGGCAACAACTTTTCTGGTGGGCAAAAACAACGGATGTCGATTGCGCGTGGCGTCATT
AACCAGCCTAAGATTCTTGTTTTAGACGATTCAACGTCTGCCTTGGATGCCAAGTCAGAAAAATTGGTACAAGAAGCCTT
AAACAAGGAATTGAAAGGCACAACGACCGTTATTATTGCCCAAAAGATTTCTTCAGTGGTGAAGGCTGATAAGATTTTAG
TTCTTGATCAGGGTCAGCTGCTTGGCGAAGGAACTCATGCTGAATTGTTAGCCAATAATGCGGTTTATCGTGAAATTTAT
GACACACAAAAAGGTAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(344-493)

ABC transporter transmembrane region (ABC_membrane)

(16-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.245

100

0.367