Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABI226_RS17235 Genome accession   NZ_CP157216
Coordinates   3257764..3260073 (-) Length   769 a.a.
NCBI ID   WP_032723438.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS22     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3252764..3265073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABI226_RS17195 (ABI226_17195) mrpB 3253231..3253662 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ABI226_RS17200 (ABI226_17200) mrpC 3253662..3254003 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ABI226_RS17205 (ABI226_17205) mrpD 3253996..3255477 (+) 1482 WP_003244432.1 Na+/H+ antiporter subunit D -
  ABI226_RS17210 (ABI226_17210) mrpE 3255483..3255959 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  ABI226_RS17215 (ABI226_17215) mrpF 3255959..3256243 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ABI226_RS17220 (ABI226_17220) mnhG 3256227..3256601 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ABI226_RS17225 (ABI226_17225) yuxO 3256640..3257020 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  ABI226_RS17230 (ABI226_17230) comA 3257039..3257683 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ABI226_RS17235 (ABI226_17235) comP 3257764..3260073 (-) 2310 WP_032723438.1 two-component system sensor histidine kinase ComP Regulator
  ABI226_RS17240 (ABI226_17240) comX 3260088..3260255 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  ABI226_RS17245 (ABI226_17245) comQ 3260243..3261142 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  ABI226_RS17250 (ABI226_17250) degQ 3261327..3261467 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ABI226_RS17255 (ABI226_17255) - 3261689..3261814 (+) 126 WP_003228793.1 hypothetical protein -
  ABI226_RS17260 (ABI226_17260) - 3261928..3262296 (+) 369 WP_003243784.1 hypothetical protein -
  ABI226_RS17265 (ABI226_17265) pdeH 3262272..3263501 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89236.71 Da        Isoelectric Point: 8.4502

>NTDB_id=1004863 ABI226_RS17235 WP_032723438.1 3257764..3260073(-) (comP) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKIHKNDKSQFMIEEISESSYGQFVGLRQGDIILKINKEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLFFYFLSIICIFYILKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATLN
LVSFATLTLFSFSAIYLHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMDIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEVGPDWNFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRGTCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=1004863 ABI226_RS17235 WP_032723438.1 3257764..3260073(-) (comP) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
TTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTATACAACTTATATCAG
TATGAATGGAATTATTATTGGGACTAAGATTCATAAAAATGATAAAAGTCAATTTATGATAGAAGAAATATCGGAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGACATCATATTAAAAATTAATAAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGTTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAAGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGCGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATACCTTGGAGAAATAGGTAAAACTTTTTTGAATAGAATTTCTTTTCTTTATA
TCATACCAATATTTAATCTTGGTATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCAACTCTTAAT
TTGGTTTCTTTTGCAACTTTGACTCTATTTTCTTTTTCAGCGATATACTTACATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTCTTTCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAGTTGGACCGGACTGGAATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATTGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGTAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTCC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGGGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGATCAAGAAAAAAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

99.87

100

0.999


Multiple sequence alignment