Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ABI226_RS17245 Genome accession   NZ_CP157216
Coordinates   3260243..3261142 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS22     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3255243..3266142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABI226_RS17210 (ABI226_17210) mrpE 3255483..3255959 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  ABI226_RS17215 (ABI226_17215) mrpF 3255959..3256243 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ABI226_RS17220 (ABI226_17220) mnhG 3256227..3256601 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ABI226_RS17225 (ABI226_17225) yuxO 3256640..3257020 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  ABI226_RS17230 (ABI226_17230) comA 3257039..3257683 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ABI226_RS17235 (ABI226_17235) comP 3257764..3260073 (-) 2310 WP_032723438.1 two-component system sensor histidine kinase ComP Regulator
  ABI226_RS17240 (ABI226_17240) comX 3260088..3260255 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  ABI226_RS17245 (ABI226_17245) comQ 3260243..3261142 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  ABI226_RS17250 (ABI226_17250) degQ 3261327..3261467 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ABI226_RS17255 (ABI226_17255) - 3261689..3261814 (+) 126 WP_003228793.1 hypothetical protein -
  ABI226_RS17260 (ABI226_17260) - 3261928..3262296 (+) 369 WP_003243784.1 hypothetical protein -
  ABI226_RS17265 (ABI226_17265) pdeH 3262272..3263501 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ABI226_RS17270 (ABI226_17270) pncB 3263638..3265110 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ABI226_RS17275 (ABI226_17275) pncA 3265126..3265677 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=1004865 ABI226_RS17245 WP_003243039.1 3260243..3261142(-) (comQ) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=1004865 ABI226_RS17245 WP_003243039.1 3260243..3261142(-) (comQ) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment